RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA700095" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27998895 27998895 PRJNA700095_P_NODE_11345_length_571_cov_5.168675_g10103_i0 PRJNA700095 11345 571 5.168675 29.51313425 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 146 2.1899999999999998e-40   NR PJF18583.1 1246581 g10103 i0 49.1 0.866900175131349 165 68 86.7 5 500 6 11 159 PJF18583.1 Glutathione S-transferase [Paramicrosporidium saccamoebae] diamond 495 146 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29293219 29293219 PRJNA700095_P_NODE_15249_length_473_cov_1.155000_g13988_i0 PRJNA700095 15249 473 1.155 5.46315 Rozella allomycis CSF55 988480 Fungi Fungi 109 2.7e-26   NR EPZ35682.1 988480 g13988 i0 43.4 0.773784355179704 122 69 77.4 0 62 427 10 131 EPZ35682.1 Reverse transcriptase, RNA-dependent DNA polymerase domain-containing protein, partial [Rozella allomycis CSF55] diamond 366 109 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29734985 29734985 PRJNA700095_P_NODE_27830_length_323_cov_2.136000_g26566_i0 PRJNA700095 27830 323 2.136 6.89928 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 80.5 5.36e-15   NR PJF19671.1 1246581 g26566 i0 36.2 0.975232198142415 105 62 97.5 1 3 317 397 496 PJF19671.1 Integral membrane protein [Paramicrosporidium saccamoebae] diamond 315 80.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;