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contig_metadata

15 rows where bioproject = "PRJNA700095" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA700095 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4511168 4511168 PRJNA700095_P_NODE_25944_length_337_cov_1.166667_g24680_i0 PRJNA700095 25944 337 1.166667 3.93166779 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 182 3.89e-41   NTclustered gi|1620128357|ref|XM_028673401.1| 5849 g24680 i0 83.417 5.12166172106825 199 29 58 4 139 335 266 70 Plasmodium gallinaceum 40S ribosomal protein S17, putative (PGAL8A_00463400), partial mRNA blastn 1726 182 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
4511227 4511227 PRJNA700095_P_NODE_35464_length_288_cov_1.065116_g34200_i0 PRJNA700095 35464 288 1.065116 3.06753408 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 191 5.41e-44   NTclustered gi|1084774101|ref|XM_018783944.1| 647221 g34200 i0 80.8 5.25347222222222 250 43 86 5 1 247 1860 1613 Plasmodium gaboni putative splicing factor 3B subunit 1 partial mRNA blastn 1513 191 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
7562124 7562124 PRJNA700095_P_NODE_4786_length_902_cov_2.780458_g3830_i0 PRJNA700095 4786 902 2.780458 25.07973116 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.2 5.44e-4   NTclustered gi|221059494|ref|XM_002260357.1| 5851 g3830 i0 100 1.08869179600887 32 0 4 0 364 395 1720 1751 Plasmodium knowlesi strain H U3 small nucleolar RNA-associated protein 12, putative (PKNH_1234100), partial mRNA blastn 982 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
11387723 11387723 PRJNA700095_P_NODE_20829_length_385_cov_3.298077_g19565_i0 PRJNA700095 20829 385 3.298077 12.69759645 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 97.1 1.67e-15   NTclustered gi|1976646300|ref|XR_005506384.1| 5851 g19565 i0 90.541 19.379220779220802 74 5 19 2 313 385 2235 2307 Plasmodium knowlesi strain H 28S ribosomal RNA (PKNH_1001000), rRNA blastn 7461 97.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
12162433 12162433 PRJNA700095_P_NODE_49050_length_255_cov_1.692308_g47786_i0 PRJNA700095 49050 255 1.692308 4.3153854 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.98e-4   NTclustered gi|1620177738|ref|XM_028684073.1| 880535 g47786 i0 100 0.12156862745098 31 0 12 0 3 33 66 36 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_1351000), partial mRNA blastn 31 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
18534963 18534963 PRJNA700095_P_NODE_24815_length_345_cov_3.786765_g23551_i0 PRJNA700095 24815 345 3.786765 13.06433925 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.033   NTclustered gi|1620167184|ref|XM_028681527.1| 880535 g23551 i0 100 0.0811594202898551 28 0 8 0 141 168 1713 1686 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_0818200), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
18535181 18535181 PRJNA700095_P_NODE_67775_length_233_cov_2.256250_g66510_i0 PRJNA700095 67775 233 2.25625 5.2570625 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 119 2.03e-22   NTclustered gi|1027957925|ref|XM_732147.2| 31271 g66510 i0 78.421 26.0214592274678 190 36 81 5 41 229 762 577 Plasmodium chabaudi chabaudi heat shock protein 90, putative (PCHAS_1311000), partial mRNA blastn 6063 119 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
21085579 21085579 PRJNA700095_P_NODE_34037_length_292_cov_3.378995_g32773_i0 PRJNA700095 34037 292 3.378995 9.8666654 Plasmodium brasilianum 5824 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.62e-4   NTclustered gi|2785764582|ref|XM_067217315.1| 5824 g32773 i0 92.857 1.31164383561644 42 2 14 1 109 149 401 442 Plasmodium brasilianum sporozoite protein essential for cell traversal (MKS88_004162), partial mRNA blastn 383 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
23636295 23636295 PRJNA700095_P_NODE_7079_length_749_cov_1.276627_g5957_i0 PRJNA700095 7079 749 1.276627 9.56193623 Plasmodium brasilianum 5824 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.021   NTclustered gi|2785761570|ref|XM_067215664.1| 5824 g5957 i0 100 0.0387182910547397 29 0 4 0 647 675 281 253 Plasmodium brasilianum uncharacterized protein (MKS88_002638), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
24909509 24909509 PRJNA700095_P_NODE_33920_length_293_cov_1.400000_g32656_i0 PRJNA700095 33920 293 1.4 4.102 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.84e-4   NTclustered gi|1620131118|ref|XM_028673862.1| 5849 g32656 i0 97.059 1.27303754266212 34 1 12 0 68 101 5262 5229 Plasmodium gallinaceum conserved Plasmodium protein, unknown function (PGAL8A_00504500), partial mRNA blastn 373 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
28693567 28693567 PRJNA700095_P_NODE_48867_length_255_cov_4.708791_g47603_i0 PRJNA700095 48867 255 4.708791 12.00741705 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 99.4 5.7299999999999996e-24   NR XP_067803689.1 323732 g47603 i0 58.4 1.82352941176471 77 32 90.6 0 234 4 8 84 XP_067803689.1 bifunctional RNA recognition motif domain/RNA-binding domain superfamily/Nucleotide-binding alpha-beta plait domain superfamily [Babesia duncani] diamond 465 99.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
28862263 28862263 PRJNA700095_P_NODE_27988_length_322_cov_1.843373_g26724_i0 PRJNA700095 27988 322 1.843373 5.93566106 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 67.4 1.44e-10   NR KAF8821376.1 476202 g26724 i0 34.9 3.64285714285714 106 65 96 2 8 316 4 108 KAF8821376.1 3' exoribonuclease family, domain 1 domain-containing protein [Cardiosporidium cionae] diamond 1173 67.8 0.994100294985251 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
30462337 30462337 PRJNA700095_P_NODE_60673_length_244_cov_0.900585_g59409_i0 PRJNA700095 60673 244 0.900585 2.1974274 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 47.4 8.47e-4   NR XP_012647374.1 1133968 g59409 i0 40 0.737704918032787 60 36 73.8 0 191 12 326 385 XP_012647374.1 conserved Plasmodium membrane protein, unknown function [Babesia microti strain RI] diamond 180 47.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
30746254 30746254 PRJNA700095_P_NODE_39434_length_277_cov_1.867647_g38170_i0 PRJNA700095 39434 277 1.867647 5.17338219 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0205   NR KAF7458112.1 83540 g38170 i0 43.1 0.552346570397112 51 26 55.2 1 163 11 145 192 KAF7458112.1 nuclear movement family protein [Cryptosporidium felis] diamond 153 43.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
31694592 31694592 PRJNA700095_P_NODE_28517_length_319_cov_0.930894_g27253_i0 PRJNA700095 28517 319 0.930894 2.96955186 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00708   NR KAF8820158.1 476202 g27253 i0 32.4 0.667711598746082 71 47 66.8 1 3 215 457 526 KAF8820158.1 hypothetical protein IE077_003488 [Cardiosporidium cionae] diamond 213 45.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;