RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA700095", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA700095 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7061735 7061735 PRJNA700095_P_NODE_26266_length_334_cov_2.605364_g25002_i0 PRJNA700095 26266 334 2.605364 8.70191576 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 289 2.1999999999999994e-73   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g25002 i0 83.036 28.9730538922156 336 39 99 13 5 334 2534 2211 Rosculus vulgaris isolate CCA sequence blastn 9677 289 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
7061762 7061762 PRJNA700095_P_NODE_31866_length_302_cov_14.139738_g30602_i0 PRJNA700095 31866 302 14.139738 42.70200876 Euglypha rotunda 39714 SAR_Eukaryotes SAR_Eukaryotes 329 1.1599999999999998e-85   NTclustered gi|83034979|gb|DQ211608.1| 39714 g30602 i0 87.086 107.337748344371 302 26 99 8 3 302 309 599 Euglypha rotunda strain Costa Rica 28S ribosomal RNA gene, partial sequence blastn 32416 329 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Euglypha Euglypha rotunda
14712099 14712099 PRJNA700095_P_NODE_16432_length_449_cov_16.010638_g15169_i0 PRJNA700095 16432 449 16.010638 71.88776462 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 283 1.42e-71   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g15169 i0 94.118 41.271714922049 187 9 42 2 1 187 3665 3849 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18531 283 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
15212752 15212752 PRJNA700095_P_NODE_29892_length_310_cov_11.388186_g28628_i0 PRJNA700095 29892 310 11.388186 35.3033766 Paulinella 39716 SAR_Eukaryotes SAR_Eukaryotes 279 1.22e-70   NTclustered gi|238617606|gb|FJ973381.1| 39717 g28628 i0 83.439 49.4129032258065 314 38 100 8 1 310 2455 2758 Paulinella chromatophora strain FK01 28S ribosomal RNA gene, partial sequence blastn 15318 279 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
18535194 18535194 PRJNA700095_P_NODE_71175_length_197_cov_7.580645_g69910_i0 PRJNA700095 71175 197 7.580645 14.93387065 uncultured Euglyphidae sp. 1764557 SAR_Eukaryotes SAR_Eukaryotes 364 1.929999999999999e-96   NTclustered gi|1093393084|gb|KX999711.1| 1764557 g69910 i0 100 100.593908629442 197 0 100 0 1 197 1614 1418 Uncultured Euglyphidae sp. clone eugly_666 small subunit ribosomal RNA gene, partial sequence blastn 19817 364 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae   uncultured Euglyphidae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;