RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA700095", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA700095 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27410255 27410255 PRJNA700095_P_NODE_13723_length_507_cov_1.571429_g12466_i0 PRJNA700095 13723 507 1.571429 7.96714503 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 145 1.86e-37   NR XP_067769161.1 135588 g12466 i0 45.7 5.07100591715976 173 83 99.4 3 506 3 295 461 XP_067769161.1 Copine family protein [Histomonas meleagridis] diamond 2571 145 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30188615 30188615 PRJNA700095_P_NODE_31432_length_305_cov_1.426724_g30168_i0 PRJNA700095 31432 305 1.426724 4.3515082 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.6 0.00349   NR XP_068367164.1 1144522 g30168 i0 33.3 6.51147540983607 69 41 67.9 1 301 95 878 941 XP_068367164.1 Phosphatidylinositol 3- and 4-kinase family protein [Tritrichomonas foetus] diamond 1986 46.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;