RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA700095", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA700095 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32454215 32454215 PRJNA700095_P_NODE_41219_length_273_cov_1.150000_g39955_i0 PRJNA700095 41219 273 1.15 3.1395 Rhodothermales bacterium 2306054 Bacteria Bacteria 47.4 0.00118   NR MFT4604114.1 2306054 g39955 i0 62.5 0.769230769230769 32 11 35.2 1 152 247 7 37 MFT4604114.1 cystathionine gamma-synthase [Rhodothermales bacterium] diamond 210 47.4 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
32674745 32674745 PRJNA700095_P_NODE_48940_length_255_cov_2.527473_g47676_i0 PRJNA700095 48940 255 2.527473 6.44505615 Salinibacter altiplanensis 1803181 Bacteria Bacteria 46.2 0.00257   NR WP_103019518.1 1803181 g47676 i0 32.1 0.988235294117647 84 50 96.5 2 253 8 425 503 WP_103019518.1 S9 family peptidase [Salinibacter altiplanensis] diamond 252 46.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter altiplanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;