RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA700095", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA700095 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27367531 27367531 PRJNA700095_P_NODE_46703_length_260_cov_1.604278_g45439_i0 PRJNA700095 46703 260 1.604278 4.1711228 Ignavibacteria bacterium 2053306 Bacteria Bacteria 55.1 2.05e-6   NR MBV6479668.1 2053306 g45439 i0 40.3 0.888461538461538 77 44 88.8 1 12 242 404 478 MBV6479668.1 Beta-barrel assembly-enhancing protease [Ignavibacteria bacterium] diamond 231 55.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29083524 29083524 PRJNA700095_P_NODE_28208_length_321_cov_1.048387_g26944_i0 PRJNA700095 28208 321 1.048387 3.36532227 Bacteria 2 Bacteria Bacteria 52 4.41e-5   NR MCB0751825.1 2026749 g26944 i0 54.5 0.897196261682243 44 20 41.1 0 288 157 2 45 MCB0751825.1 tetratricopeptide repeat protein [Ignavibacteriota bacterium] diamond 288 52 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29924882 29924882 PRJNA700095_P_NODE_10991_length_582_cov_4.074656_g9750_i0 PRJNA700095 10991 582 4.074656 23.71449792 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 132 4.76e-32   NR MCP5061243.1 2026749 g9750 i0 43.8 1 194 101 99 7 7 582 354 541 MCP5061243.1 RNA-directed DNA polymerase [Ignavibacteriota bacterium] diamond 582 132 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;