RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA700095", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA700095 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27556465 27556465 PRJNA700095_P_NODE_35744_length_287_cov_1.429907_g34480_i0 PRJNA700095 35744 287 1.429907 4.10383309 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 58.5 1.64e-7   NR MCX7726210.1 2813024 g34480 i0 34.8 0.930313588850174 89 48 89.9 2 274 17 56 137 MCX7726210.1 YCF48-related protein [Chitinispirillaceae bacterium] diamond 267 58.5 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
30746245 30746245 PRJNA700095_P_NODE_24614_length_347_cov_1.952555_g23350_i0 PRJNA700095 24614 347 1.952555 6.77536585 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 58.9 2.36e-7   NR MCX7726210.1 2813024 g23350 i0 36 0.769452449567723 89 47 74.4 2 300 43 56 137 MCX7726210.1 YCF48-related protein [Chitinispirillaceae bacterium] diamond 267 58.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;