RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA700095", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA700095 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14712132 14712132 PRJNA700095_P_NODE_23732_length_355_cov_1.556738_g22468_i0 PRJNA700095 23732 355 1.556738 5.5264199 Aliifodinibius sp. S!AR15-1 1872440 Bacteria Bacteria 152 7.63e-41   NR WP_310687615.1 2950437 g22468 i0 62.4 8.95774647887324 117 44 98.9 0 353 3 257 373 WP_310687615.1 energy-dependent translational throttle protein EttA [Aliifodinibius sp. S!AR15-10] diamond 3180 152 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Aliifodinibius sp. S!AR15-10
26956035 26956035 PRJNA700095_P_NODE_12962_length_526_cov_2.315673_g11710_i0 PRJNA700095 12962 526 2.315673 12.18043998 Balneolaceae bacterium 2053516 Bacteria Bacteria 166 2.08e-49   NR HKL15208.1 2053516 g11710 i0 68.2 2.51520912547529 110 33 62.7 2 193 522 5 112 HKL15208.1 hypothetical protein [Balneolaceae bacterium] diamond 1323 166 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;