RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA700095", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA700095 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1184185 1184185 PRJNA700095_P_NODE_26481_length_333_cov_0.992308_g25217_i0 PRJNA700095 26481 333 0.992308 3.30438564 Candidatus Mycosynbacter 2831665 Bacteria Bacteria 449 9.52e-122   NTclustered gi|2028829559|gb|CP072328.1| 713051 g25217 i0 91.071 264.753753753754 336 24 100 6 1 333 906557 906889 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 88163 449 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
30935920 30935920 PRJNA700095_P_NODE_24434_length_348_cov_3.778182_g23170_i0 PRJNA700095 24434 348 3.778182 13.14807336 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 53.9 3.01e-6   NR MBC7746619.1 2026720 g23170 i0 39.4 3.91379310344828 66 40 56.9 0 284 87 16 81 MBC7746619.1 NUDIX hydrolase [Candidatus Saccharibacteria bacterium] diamond 1362 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;