RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA700095", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA700095 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13436877 13436877 PRJNA700095_P_NODE_19951_length_395_cov_12.285714_g18688_i0 PRJNA700095 19951 395 12.285714 48.5285703 Karpovia croatica 2925417 Root_unresolved Root_unresolved 102 3.7e-17   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g18688 i0 87.64 15.4455696202532 89 9 22 2 306 393 6020 6107 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6101 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
27462122 27462122 PRJNA700095_P_NODE_27603_length_325_cov_1.051587_g26339_i0 PRJNA700095 27603 325 1.051587 3.41765775 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 57.4 2.02e-7   NR XP_013762493.1 461836 g26339 i0 33.8 0.738461538461539 80 53 73.8 0 306 67 11 90 XP_013762493.1 uncharacterized protein AMSG_00767 [Thecamonas trahens ATCC 50062] diamond 240 57.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30588137 30588137 PRJNA700095_P_NODE_29033_length_315_cov_3.793388_g27769_i0 PRJNA700095 29033 315 3.793388 11.9491722 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 78.6 2.17e-14   NR XP_013759207.1 461836 g27769 i0 64.2 0.504761904761905 53 19 50.5 0 295 137 448 500 XP_013759207.1 glucoamylase [Thecamonas trahens ATCC 50062] diamond 159 78.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30725788 30725788 PRJNA700095_P_NODE_44674_length_264_cov_3.041885_g43410_i0 PRJNA700095 44674 264 3.041885 8.0305764 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.6 3.31e-12   NR XP_013757543.1 461836 g43410 i0 64.6 6.32954545454545 48 17 54.5 0 144 1 453 500 XP_013757543.1 Ca2:Cation Antiporter family [Thecamonas trahens ATCC 50062] diamond 1671 72 0.994444444444444 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;