RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA699078" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA699078 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29703301 29703301 PRJNA699078_S_NODE_80530_length_187_cov_1.507246_g79581_i0 PRJNA699078 80530 187 1.507246 2.81855002 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00514   NR KAF4664708.1 32597 g79581 i0 51.1 2.90374331550802 47 19 69 2 130 2 432 478 KAF4664708.1 hypothetical protein FOL46_004084 [Perkinsus olseni] diamond 543 44.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31863810 31863810 PRJNA699078_S_NODE_98417_length_168_cov_1.554622_g97468_i0 PRJNA699078 98417 168 1.554622 2.61176496 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.2 5.92e-9   NR KAF4690691.1 32597 g97468 i0 46.3 20.0535714285714 54 28 96.4 1 2 163 61 113 KAF4690691.1 snoRNA-binding protein [Perkinsus olseni] diamond 3369 58.5 0.994871794871795 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32390688 32390688 PRJNA699078_S_NODE_45879_length_253_cov_3.352941_g44930_i0 PRJNA699078 45879 253 3.352941 8.48294073 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0126   NR KAF4665653.1 32597 g44930 i0 42.6 2.95256916996047 68 31 73.5 2 216 31 520 585 KAF4665653.1 hypothetical protein FOZ61_010661 [Perkinsus olseni] diamond 747 44.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;