RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA699078" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA699078 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5786433 5786433 PRJNA699078_S_NODE_89625_length_177_cov_0.984375_g88676_i0 PRJNA699078 89625 177 0.984375 1.74234375 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 52.8 0.015   NTclustered gi|2124392370|ref|XM_044711932.1| 5763 g88676 i0 100 0.31638418079096 28 0 16 0 22 49 687 660 Naegleria fowleri uncharacterized protein (FDP41_008113), partial mRNA blastn 56 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
7061209 7061209 PRJNA699078_S_NODE_7046_length_543_cov_37.550607_g6191_i0 PRJNA699078 7046 543 37.550607 203.89979601 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 149 1.5499999999999998e-42   NR XP_044555121.1 51637 g6191 i0 48.4 0.867403314917127 157 80 86.2 1 501 34 1 157 XP_044555121.1 uncharacterized protein C9374_009804 [Naegleria lovaniensis] diamond 471 149 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
18533662 18533662 PRJNA699078_S_NODE_14795_length_417_cov_6.888587_g13857_i0 PRJNA699078 14795 417 6.888587 28.72540779 root 1 Root_unresolved Root_unresolved 177 1.31e-51   NR XP_044564599.1 5763 g13857 i0 62.9 86.6330935251799 124 46 89.2 0 26 397 252 375 XP_044564599.1 uncharacterized protein FDP41_001039 [Naegleria fowleri] diamond 36126 177 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26998880 26998880 PRJNA699078_S_NODE_79702_length_188_cov_1.496403_g78753_i0 PRJNA699078 79702 188 1.496403 2.81323764 root 1 Root_unresolved Root_unresolved 83.6 6.89e-17   NR XP_002671353.1 5762 g78753 i0 56.5 7.73936170212766 62 27 98.9 0 1 186 314 375 XP_002671353.1 uncharacterized protein NAEGRDRAFT_59458 [Naegleria gruberi] diamond 1455 84 0.995238095238095 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28061773 28061773 PRJNA699078_S_NODE_64205_length_211_cov_1.283951_g63256_i0 PRJNA699078 64205 211 1.283951 2.70913661 Acrasis kona 1008807 Heterolobosea other_Eukaryota 58.5 5.26e-8   NR KAL0487918.1 1008807 g63256 i0 54.8 1.74881516587678 62 27 86.7 1 27 209 229 290 KAL0487918.1 NAD+ synthase NadE [Acrasis kona] diamond 369 58.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28156795 28156795 PRJNA699078_S_NODE_44565_length_258_cov_1.244019_g43616_i0 PRJNA699078 44565 258 1.244019 3.20956902 Acrasis kona 1008807 Heterolobosea other_Eukaryota 114 7.57e-28   NR KAL0479427.1 1008807 g43616 i0 62.3 1.7906976744186 77 29 89.5 0 258 28 298 374 KAL0479427.1 serine/threonine kinase 4 [Acrasis kona] diamond 462 114 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29356461 29356461 PRJNA699078_S_NODE_77989_length_190_cov_1.843972_g77040_i0 PRJNA699078 77989 190 1.843972 3.5035468 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 48.9 1.23e-4   NR XP_044541602.1 51637 g77040 i0 38.7 0.978947368421053 62 38 97.9 0 189 4 393 454 XP_044541602.1 uncharacterized protein C9374_014280 [Naegleria lovaniensis] diamond 186 48.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30114244 30114244 PRJNA699078_S_NODE_11932_length_450_cov_40.229426_g11010_i0 PRJNA699078 11932 450 40.229426 181.032417 Acrasis kona 1008807 Heterolobosea other_Eukaryota 93.6 1.54e-19   NR KAL0483913.1 1008807 g11010 i0 40.7 0.9 135 74 88 2 450 55 196 327 KAL0483913.1 ribosomal protein P0 [Acrasis kona] diamond 405 93.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31611047 31611047 PRJNA699078_S_NODE_73196_length_197_cov_1.054054_g72247_i0 PRJNA699078 73196 197 1.054054 2.07648638 Naegleria 5761 Heterolobosea other_Eukaryota 74.3 9.26e-14   NR XP_044556297.1 5763 g72247 i0 56.3 1.9492385786802 64 28 97.5 0 1 192 182 245 XP_044556297.1 uncharacterized protein FDP41_010110 [Naegleria fowleri] diamond 384 74.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32654257 32654257 PRJNA699078_S_NODE_105540_length_163_cov_2.280702_g104591_i0 PRJNA699078 105540 163 2.280702 3.71754426 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 3.68e-6   NR XP_002676377.1 5762 g104591 i0 59.6 7.50920245398773 47 17 84.7 2 156 19 432 477 XP_002676377.1 uncharacterized protein NAEGRDRAFT_34178 [Naegleria gruberi] diamond 1224 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;