RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA699078" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA699078 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27283615 27283615 PRJNA699078_S_NODE_4603_length_637_cov_11.329932_g3829_i0 PRJNA699078 4603 637 11.329932 72.17166684 Allomyces 28581 Fungi Fungi 150 2.09e-42   NR KAJ3348302.1 64505 g3829 i0 49.7 7.37048665620094 149 69 68.8 2 8 445 21 166 KAJ3348302.1 ribosomal protein S15 [Allomyces javanicus] diamond 4695 150 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus
32232732 32232732 PRJNA699078_S_NODE_75878_length_193_cov_1.444444_g74929_i0 PRJNA699078 75878 193 1.444444 2.78777692 Blastocladiella britannica 64508 Fungi Fungi 42.4 0.0262   NR KAI9218017.1 64508 g74929 i0 42.6 3.40414507772021 54 31 83.9 0 4 165 235 288 KAI9218017.1 hypothetical protein BC828DRAFT_350879 [Blastocladiella britannica] diamond 657 42.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;