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contig_metadata

27 rows where bioproject = "PRJNA699078", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 27 ✖

tax_kingdom 1

  • Metazoa · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA699078 · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3233252 3233252 PRJNA699078_S_NODE_46583_length_251_cov_2.594059_g45634_i0 PRJNA699078 46583 251 2.594059 6.51108809 Strongyloides papillosus 174720 Nematoda Nematoda 95.3 3.73e-15   NTclustered gi|687022650|emb|LM525564.1| 174720 g45634 i0 85.87 12.7529880478088 92 9 36 4 161 250 461188 461099 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000009 blastn 3201 95.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
8335620 8335620 PRJNA699078_S_NODE_56087_length_227_cov_1.764045_g55138_i0 PRJNA699078 56087 227 1.764045 4.00438215 Strongyloides papillosus 174720 Nematoda Nematoda 54.7 0.006   NTclustered gi|687023266|emb|LM525931.1| 174720 g55138 i0 100 0.127753303964758 29 0 13 0 55 83 5473 5501 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000303 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
12160978 12160978 PRJNA699078_S_NODE_13130_length_435_cov_72.339378_g12198_i0 PRJNA699078 13130 435 72.339378 314.6762943 Caenorhabditis elegans 6239 Nematoda Nematoda 82.4 5.36e-11   NTclustered gi|351047525|emb|FO080366.1| 6239 g12198 i0 96 0.570114942528736 50 2 11 0 383 432 15373 15422 Caenorhabditis elegans Cosmid T26A5, complete sequence blastn 248 82.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
15212672 15212672 PRJNA699078_S_NODE_40512_length_271_cov_3.454955_g39563_i0 PRJNA699078 40512 271 3.454955 9.36292805 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.9 6.5e-11   NR CDJ90902.1 6289 g39563 i0 96.9 23.5129151291513 32 1 35.4 0 3 98 150 181 CDJ90902.1 RNA polymerase domain containing protein [Haemonchus contortus] diamond 6372 65.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
16487072 16487072 PRJNA699078_S_NODE_85793_length_181_cov_1.181818_g84844_i0 PRJNA699078 85793 181 1.181818 2.13909058 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.5 8.16e-16   NR KAL3090841.1 97005 g84844 i0 67.2 10.6077348066298 58 19 96.1 0 5 178 78 135 KAL3090841.1 hypothetical protein niasHS_007216 [Heterodera schachtii] diamond 1920 80.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii
18533602 18533602 PRJNA699078_S_NODE_10915_length_464_cov_35.578313_g10002_i0 PRJNA699078 10915 464 35.578313 165.08337232 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 194 2.3900000000000007e-59   NR CAJ0597926.1 53992 g10002 i0 67.6 42.239224137931 139 45 89.9 0 2 418 98 236 CAJ0597926.1 unnamed protein product [Cylicocyclus nassatus] diamond 19599 195 0.994871794871795 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Cylicocyclus Cylicocyclus nassatus
18533774 18533774 PRJNA699078_S_NODE_22455_length_357_cov_3.474026_g21506_i0 PRJNA699078 22455 357 3.474026 12.40227282 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.034   NTclustered gi|1557394408|emb|LR031564.1| 45931 g21506 i0 100 0.0784313725490196 28 0 8 0 330 357 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
18533842 18533842 PRJNA699078_S_NODE_27375_length_328_cov_2.161290_g26426_i0 PRJNA699078 27375 328 2.16129 7.0890312 Meloidogyne enterolobii 390850 Nematoda Nematoda 110 2.68e-29   NR CAD2164363.1 390850 g26426 i0 61 2.85365853658537 77 30 70.4 0 49 279 6 82 CAD2164363.1 unnamed protein product [Meloidogyne enterolobii] diamond 936 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
26904218 26904218 PRJNA699078_S_NODE_86381_length_180_cov_1.679389_g85432_i0 PRJNA699078 86381 180 1.679389 3.0229002 Metazoa 33208 Nematoda Nematoda 48.5 1.45e-4   NR UMM31831.1 6238 g85432 i0 57.9 6.65 38 16 63.3 0 2 115 353 390 UMM31831.1 hypothetical protein L5515_005867 [Caenorhabditis briggsae] diamond 1197 48.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
27082719 27082719 PRJNA699078_S_NODE_34142_length_296_cov_2.060729_g33193_i0 PRJNA699078 34142 296 2.060729 6.09975784 Caenorhabditis angaria 860376 Nematoda Nematoda 62 1.04e-8   NR CAI5453693.1 860376 g33193 i0 65.1 1.3277027027027 43 15 43.6 0 4 132 267 309 CAI5453693.1 unnamed protein product [Caenorhabditis angaria] diamond 393 62 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
27378646 27378646 PRJNA699078_S_NODE_62863_length_213_cov_1.902439_g61914_i0 PRJNA699078 62863 213 1.902439 4.05219507 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.5 4.09e-12   NR MCP9260784.1 6287 g61914 i0 69.6 7.74647887323944 46 14 64.8 0 139 2 454 499 MCP9260784.1 Asparaginyl-tRNA synthetase [Dirofilaria immitis] diamond 1650 71.2 0.990168539325843 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
27915044 27915044 PRJNA699078_S_NODE_94945_length_171_cov_1.442623_g93996_i0 PRJNA699078 94945 171 1.442623 2.46688533 Trichinella 6333 Nematoda Nematoda 85.5 9.1e-20   NR KAL1245570.1 6334 g93996 i0 64.3 4.91228070175439 56 20 98.2 0 169 2 56 111 KAL1245570.1 Peptidyl-prolyl cis-trans isomerase [Trichinella spiralis] diamond 840 85.5 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
28072961 28072961 PRJNA699078_S_NODE_8025_length_518_cov_25.253731_g7141_i0 PRJNA699078 8025 518 25.253731 130.81432658 Metazoa 33208 Nematoda Nematoda 142 1.2899999999999999e-39   NR XP_003380006.1 6334 g7141 i0 71.7 30.9092664092664 92 26 53.3 0 498 223 79 170 XP_003380006.1 40S ribosomal protein S23 [Trichinella spiralis] diamond 16011 143 0.993006993006993 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
28566968 28566968 PRJNA699078_S_NODE_85707_length_181_cov_1.333333_g84758_i0 PRJNA699078 85707 181 1.333333 2.41333273 Pristionchus entomophagus 358040 Nematoda Nematoda 51.6 1.23e-5   NR GMT00500.1 358040 g84758 i0 42.6 1.79005524861878 54 31 89.5 0 175 14 851 904 GMT00500.1 hypothetical protein PENTCL1PPCAC_22674 [Pristionchus entomophagus] diamond 324 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus entomophagus
28756434 28756434 PRJNA699078_S_NODE_71267_length_199_cov_3.873333_g70318_i0 PRJNA699078 71267 199 3.873333 7.70793267 Mesorhabditis belari 2138241 Nematoda Nematoda 43.5 0.00945   NR CAJ0930379.1 2138241 g70318 i0 51.4 0.557788944723618 37 18 55.8 0 190 80 177 213 CAJ0930379.1 unnamed protein product, partial [Mesorhabditis belari] diamond 111 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
28914102 28914102 PRJNA699078_S_NODE_47168_length_250_cov_1.248756_g46219_i0 PRJNA699078 47168 250 1.248756 3.12189 Loa loa 7209 Nematoda Nematoda 64.3 1e-9   NR XP_020302711.1 7209 g46219 i0 43.4 2.976 83 46 98.4 1 247 2 377 459 XP_020302711.1 fidgetin protein [Loa loa] diamond 744 64.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
29135596 29135596 PRJNA699078_S_NODE_109969_length_154_cov_2.085714_g109020_i0 PRJNA699078 109969 154 2.085714 3.21199956 Caenorhabditis remanei 31234 Nematoda Nematoda 49.7 2.02e-5   NR XP_003098871.2 31234 g109020 i0 45.1 1.67532467532468 51 28 99.4 0 154 2 87 137 XP_003098871.2 hypothetical protein GCK72_016312 [Caenorhabditis remanei] diamond 258 49.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
29651347 29651347 PRJNA699078_S_NODE_4790_length_627_cov_15.866782_g4009_i0 PRJNA699078 4790 627 15.866782 99.48472314 Metazoa 33208 Nematoda Nematoda 76.3 4.46e-14   NR XP_020301936.1 7209 g4009 i0 87.8 1.8755980861244 41 5 19.6 0 625 503 53 93 XP_020301936.1 ubiquitin-fold modifier 1 [Loa loa] diamond 1176 77 0.990909090909091 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
30852169 30852169 PRJNA699078_S_NODE_6274_length_565_cov_24.017442_g5434_i0 PRJNA699078 6274 565 24.017442 135.6985473 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 153 1.12e-41   NR CAD5208695.1 6326 g5434 i0 44.8 8.5646017699115 181 90 94 5 560 30 160 334 CAD5208695.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 4839 154 0.993506493506494 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
30999056 30999056 PRJNA699078_S_NODE_59934_length_219_cov_1.517647_g58985_i0 PRJNA699078 59934 219 1.517647 3.3236469300000002 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 67.8 1.44e-11   NR APZ88408.1 6326 g58985 i0 50.8 1.58904109589041 59 27 78.1 2 204 34 172 230 APZ88408.1 GPX-5 [Bursaphelenchus xylophilus] diamond 348 67.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31378450 31378450 PRJNA699078_S_NODE_4256_length_656_cov_2.403624_g3504_i0 PRJNA699078 4256 656 2.403624 15.76777344 Steinernema carpocapsae 34508 Nematoda Nematoda 58.5 3.05e-6   NR TKR96892.1 34508 g3504 i0 34.8 0.420731707317073 92 58 42.1 1 632 357 172 261 TKR96892.1 hypothetical protein L596_010842 [Steinernema carpocapsae] diamond 276 58.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
31473362 31473362 PRJNA699078_S_NODE_33156_length_300_cov_1.864542_g32207_i0 PRJNA699078 33156 300 1.864542 5.593626 Pristionchus fissidentatus 1538716 Nematoda Nematoda 74.3 5.02e-14   NR GMT19355.1 1538716 g32207 i0 40.8 1.87 98 57 98 1 298 5 66 162 GMT19355.1 hypothetical protein PFISCL1PPCAC_10652, partial [Pristionchus fissidentatus] diamond 561 74.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
31757832 31757832 PRJNA699078_S_NODE_45077_length_256_cov_1.743961_g44128_i0 PRJNA699078 45077 256 1.743961 4.46454016 Dracunculus medinensis 318479 Nematoda Nematoda 87.8 5.64e-20   NR VDN59694.1 318479 g44128 i0 70 0.703125 60 18 70.3 0 6 185 32 91 VDN59694.1 unnamed protein product [Dracunculus medinensis] diamond 180 87.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
31757837 31757837 PRJNA699078_S_NODE_81297_length_186_cov_1.518248_g80348_i0 PRJNA699078 81297 186 1.518248 2.82394128 Meloidogyne graminicola 189291 Nematoda Nematoda 56.2 3.11e-7   NR KAF7638047.1 189291 g80348 i0 43.5 2 62 35 100 0 1 186 562 623 KAF7638047.1 GLUE N-terminal domain-containing protein [Meloidogyne graminicola] diamond 372 56.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
32264372 32264372 PRJNA699078_S_NODE_101838_length_166_cov_1.128205_g100889_i0 PRJNA699078 101838 166 1.128205 1.8728203 Ditylenchus destructor 166010 Nematoda Nematoda 99.4 1.11e-22   NR KAI1717475.1 166010 g100889 i0 83.6 3.9578313253012 55 9 99.4 0 166 2 391 445 KAI1717475.1 56kDa selenium binding protein (SBP56) domain-containing protein [Ditylenchus destructor] diamond 657 99.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
32485759 32485759 PRJNA699078_S_NODE_20999_length_366_cov_4.984227_g20050_i0 PRJNA699078 20999 366 4.984227 18.24227082 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 77.4 1.33e-14   NR CAD5217367.1 465554 g20050 i0 42 1.63934426229508 100 57 82 1 60 359 115 213 CAD5217367.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 600 77.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
32769247 32769247 PRJNA699078_S_NODE_66860_length_206_cov_1.987261_g65911_i0 PRJNA699078 66860 206 1.987261 4.09375766 Caenorhabditis bovis 2654633 Nematoda Nematoda 70.9 2.68e-12   NR CAB3401274.1 2654633 g65911 i0 49.3 2.00970873786408 67 33 96.1 1 199 2 377 443 CAB3401274.1 unnamed protein product [Caenorhabditis bovis] diamond 414 70.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis bovis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;