RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA699078", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA699078 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26734132 26734132 PRJNA699078_S_NODE_16601_length_400_cov_14.552707_g15656_i0 PRJNA699078 16601 400 14.552707 58.210828 Olpidium bornovanus 278681 Fungi Fungi 117 1.36e-29   NR KAG5463641.1 278681 g15656 i0 48.4 6.6375 128 62 93.8 2 382 8 103 229 KAG5463641.1 MAG: ribosomal L27e protein family-domain-containing protein, partial [Olpidium bornovanus] diamond 2655 117 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
29608599 29608599 PRJNA699078_S_NODE_58750_length_221_cov_2.889535_g57801_i0 PRJNA699078 58750 221 2.889535 6.38587235 Olpidium bornovanus 278681 Fungi Fungi 95.1 9.87e-21   NR BAL15351.1 278681 g57801 i0 61.6 1.98190045248869 73 28 99.1 0 221 3 127 199 BAL15351.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 438 95.1 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;