RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA699078", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA699078 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23635892 23635892 PRJNA699078_S_NODE_91439_length_175_cov_1.047619_g90490_i0 PRJNA699078 91439 175 1.047619 1.83333325 Ureaplasma sp. 1965234 Bacteria Bacteria 102 2.7300000000000003e-26   NR MDE5617225.1 1965234 g90490 i0 89.7 0.994285714285714 58 4 96 1 3 170 44 101 MDE5617225.1 30S ribosomal protein S9 [Ureaplasma sp.] diamond 174 102 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Mycoplasmoidaceae Ureaplasma Ureaplasma sp.
29766698 29766698 PRJNA699078_S_NODE_28511_length_322_cov_2.168498_g27562_i0 PRJNA699078 28511 322 2.168498 6.98256356 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 161 1.0800000000000001e-44   NR MBR4495757.1 2053494 g27562 i0 67 2.94409937888199 106 35 98.8 0 318 1 281 386 MBR4495757.1 pyridoxal-phosphate dependent enzyme [Acholeplasmatales bacterium] diamond 948 161 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;