RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA699078", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 5 ✖

tax_kingdom 1

  • Bacillati · 5 ✖

bioproject 1

  • PRJNA699078 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26619097 26619097 PRJNA699078_S_NODE_53941_length_232_cov_1.874317_g52992_i0 PRJNA699078 53941 232 1.874317 4.34841544 root 1 Root_unresolved Root_unresolved 66.6 1.21e-10   NR MFN8531041.1 2052143 g52992 i0 49.1 5.21120689655172 55 28 71.1 0 2 166 385 439 MFN8531041.1 putative aminohydrolase SsnA [Anaerolineae bacterium] diamond 1209 66.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29482426 29482426 PRJNA699078_S_NODE_106530_length_163_cov_0.912281_g105581_i0 PRJNA699078 106530 163 0.912281 1.48701803 Chloroflexota bacterium 2026724 Bacteria Bacteria 76.6 1.42e-14   NR MBI5305450.1 2026724 g105581 i0 64.2 0.975460122699387 53 19 97.5 0 160 2 179 231 MBI5305450.1 hypothetical protein [Chloroflexota bacterium] diamond 159 76.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29841203 29841203 PRJNA699078_S_NODE_14371_length_422_cov_3.721180_g13433_i0 PRJNA699078 14371 422 3.72118 15.7033796 FCB group 1783270 Bacteria Bacteria 151 4.139999999999999e-43   NR MDQ4075875.1 2026724 g13433 i0 49.6 10.1303317535545 141 70 99.5 1 421 2 57 197 MDQ4075875.1 superoxide dismutase [Chloroflexota bacterium] diamond 4275 151 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31357997 31357997 PRJNA699078_S_NODE_19476_length_377_cov_3.996951_g18528_i0 PRJNA699078 19476 377 3.996951 15.06850527 Bacillati 1783272 Bacteria Bacteria 56.2 3.07e-6   NR MCA9938236.1 2073117 g18528 i0 38.9 3.12732095490716 95 48 75.6 3 5 289 475 559 MCA9938236.1 nucleoside kinase [Anaerolineales bacterium] diamond 1179 56.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31694574 31694574 PRJNA699078_S_NODE_89757_length_176_cov_2.456693_g88808_i0 PRJNA699078 89757 176 2.456693 4.32377968 Chloroflexota bacterium 2026724 Bacteria Bacteria 54.3 1.26e-6   NR MDQ2828011.1 2026724 g88808 i0 50 2.625 50 24 85.2 1 172 23 724 772 MDQ2828011.1 TIR domain-containing protein [Chloroflexota bacterium] diamond 462 54.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;