RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA699078" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJNA699078 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10112714 10112714 PRJNA699078_S_NODE_33628_length_298_cov_2.024096_g32679_i0 PRJNA699078 33628 298 2.024096 6.03180608 Sphaeropleales 35491 Plants Plants 69.7 2.45e-11   NR KAI8474822.1 39955 g32679 i0 34.5 2.36577181208054 84 55 84.6 0 255 4 846 929 KAI8474822.1 MAG: hypothetical protein J3K34DRAFT_517905 [Monoraphidium minutum] diamond 705 70.1 0.994293865905849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
28030338 28030338 PRJNA699078_S_NODE_87545_length_179_cov_1.200000_g86596_i0 PRJNA699078 87545 179 1.2 2.148 Monoraphidium minutum 39955 Plants Plants 64.7 2.76e-10   NR KAI8464399.1 39955 g86596 i0 50 6.70391061452514 58 29 97.2 0 4 177 321 378 KAI8464399.1 MAG: tRNA-guanine(15) transglycosylase-like protein [Monoraphidium minutum] diamond 1200 64.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
28061766 28061766 PRJNA699078_S_NODE_106585_length_163_cov_0.912281_g105636_i0 PRJNA699078 106585 163 0.912281 1.48701803 Micractinium tetrahymenae 2728915 Plants Plants 47 3.11e-4   NR KAL4459165.1 2728915 g105636 i0 56.8 2.02453987730061 37 16 68.1 0 161 51 143 179 KAL4459165.1 hypothetical protein ABPG75_014030 [Micractinium tetrahymenae] diamond 330 47 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium tetrahymenae
28230662 28230662 PRJNA699078_S_NODE_31946_length_305_cov_2.988281_g30997_i0 PRJNA699078 31946 305 2.988281 9.11425705 Eukaryota 2759 Plants Plants 60.8 3.08e-8   NR XP_002951445.1 3068 g30997 i0 38.9 3.94426229508197 95 47 87.5 2 305 39 249 338 XP_002951445.1 uncharacterized protein VOLCADRAFT_91941 [Volvox carteri f. nagariensis] diamond 1203 61.2 0.993464052287582 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
29103921 29103921 PRJNA699078_S_NODE_43928_length_260_cov_1.407583_g42979_i0 PRJNA699078 43928 260 1.407583 3.6597158 Auxenochlorella protothecoides 3075 Plants Plants 93.6 1.6400000000000002e-21   NR RMZ54723.1 3075 g42979 i0 50 0.992307692307692 86 43 99.2 0 1 258 105 190 RMZ54723.1 hypothetical protein APUTEX25_003101, partial [Auxenochlorella protothecoides] diamond 258 93.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
29388108 29388108 PRJNA699078_S_NODE_27349_length_328_cov_2.691756_g26400_i0 PRJNA699078 27349 328 2.691756 8.82895968 Pleodorina starrii 330485 Plants Plants 69.3 9.48e-12   NR GLC63338.1 330485 g26400 i0 59.7 1.66463414634146 62 14 46.6 1 188 36 9 70 GLC63338.1 hypothetical protein PLESTF_000025700 [Pleodorina starrii] diamond 546 69.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
30789037 30789037 PRJNA699078_S_NODE_12894_length_438_cov_23.637532_g11965_i0 PRJNA699078 12894 438 23.637532 103.53239016 Eukaryota 2759 Plants Plants 107 1.0699999999999997e-23   NR PRW32846.1 3076 g11965 i0 50.4 14.1095890410959 125 61 84.9 1 18 389 69 193 PRW32846.1 60S ribosomal L19-2 isoform A [Chlorella sorokiniana] diamond 6180 108 0.990740740740741 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31010168 31010168 PRJNA699078_S_NODE_86554_length_180_cov_1.381679_g85605_i0 PRJNA699078 86554 180 1.381679 2.4870222 Chlorophyta 3041 Plants Plants 64.7 6.98e-11   NR MEW5299441.1 2578422 g85605 i0 56.7 6 60 25 98.3 1 2 178 88 147 MEW5299441.1 hypothetical protein [Sanguina aurantia] diamond 1080 64.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
31167875 31167875 PRJNA699078_S_NODE_11855_length_451_cov_17.512438_g10933_i0 PRJNA699078 11855 451 17.512438 78.98109538 Eukaryota 2759 Plants Plants 132 7.27e-36   NR KAF5835469.1 3046 g10933 i0 47.6 19.0909090909091 124 65 82.5 0 451 80 39 162 KAF5835469.1 60S ribosomal protein L18a-2 [Dunaliella salina] diamond 8610 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31219837 31219837 PRJNA699078_S_NODE_23895_length_348_cov_2.481605_g22946_i0 PRJNA699078 23895 348 2.481605 8.6359854 [Myrmecia] bisecta 41462 Plants Plants 43.5 0.0429   NR KAK9817134.1 41462 g22946 i0 43.8 0.413793103448276 48 26 41.4 1 347 204 146 192 KAK9817134.1 hypothetical protein WJX72_010029 [[Myrmecia] bisecta] diamond 144 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
32800688 32800688 PRJNA699078_S_NODE_93800_length_172_cov_1.691057_g92851_i0 PRJNA699078 93800 172 1.691057 2.90861804 Helicosporidium sp. ATCC 5 1907511 Plants Plants 43.5 0.00719   NR KDD75821.1 1291522 g92851 i0 41.2 1.18604651162791 68 22 87.2 2 20 169 152 219 KDD75821.1 ribosomal protein L6e [Helicosporidium sp. ATCC 50920] diamond 204 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
32863794 32863794 PRJNA699078_S_NODE_59520_length_220_cov_1.315789_g58571_i0 PRJNA699078 59520 220 1.315789 2.8947358 Scenedesmus sp. PABB 2909984 Plants Plants 47 9.12e-4   NR KAF8055331.1 2742167 g58571 i0 50 2.29090909090909 40 20 54.5 0 58 177 1189 1228 KAF8055331.1 SYM1 [Scenedesmus sp. PABB004] diamond 504 47 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
32895155 32895155 PRJNA699078_S_NODE_18780_length_382_cov_8.477477_g17833_i0 PRJNA699078 18780 382 8.477477 32.38396214 Trebouxia sp. A1-2 2608996 Plants Plants 118 2.3899999999999993e-31   NR KAA6424298.1 2608996 g17833 i0 56 2.56806282722513 109 48 85.6 0 1 327 27 135 KAA6424298.1 MAG: histone H3 [Trebouxia sp. A1-2] diamond 981 118 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;