RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA699078", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA699078 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26893111 26893111 PRJNA699078_S_NODE_38641_length_278_cov_2.043668_g37692_i0 PRJNA699078 38641 278 2.043668 5.68139704 Lentisphaeria bacterium 2053569 Bacteria Bacteria 66.6 7.56e-12   NR MBO7147636.1 2053569 g37692 i0 37.1 1.89928057553957 89 56 96 0 10 276 9 97 MBO7147636.1 hypothetical protein [Lentisphaeria bacterium] diamond 528 66.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32496957 32496957 PRJNA699078_S_NODE_98159_length_168_cov_2.184874_g97210_i0 PRJNA699078 98159 168 2.184874 3.67058832 PVC group 1783257 Bacteria Bacteria 73.9 1.14e-13   NR MBQ9788854.1 2053569 g97210 i0 59.6 4.67857142857143 52 21 92.9 0 9 164 319 370 MBQ9788854.1 type III PLP-dependent enzyme [Lentisphaeria bacterium] diamond 786 73.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;