RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA699078", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA699078 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30682866 30682866 PRJNA699078_S_NODE_31493_length_307_cov_3.065891_g30544_i0 PRJNA699078 31493 307 3.065891 9.41228537 Chlamydiales bacterium 2047757 Bacteria Bacteria 43.5 0.0416   NR MFI5343144.1 2047757 g30544 i0 31.3 0.625407166123778 64 43 62.5 1 260 69 173 235 MFI5343144.1 type IV secretion system protein TraC [Chlamydiales bacterium] diamond 192 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31326229 31326229 PRJNA699078_S_NODE_95615_length_170_cov_2.231405_g94666_i0 PRJNA699078 95615 170 2.231405 3.7933885 Bacteria 2 Bacteria Bacteria 59.3 1.74e-8   NR MEN9343412.1 2081524 g94666 i0 59.6 9 47 19 82.9 0 3 143 268 314 MEN9343412.1 thioredoxin reductase [Chlamydiota bacterium] diamond 1530 59.3 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;