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contig_metadata

13 rows where bioproject = "PRJNA699078" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 13 ✖

bioproject 1

  • PRJNA699078 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19809047 19809047 PRJNA699078_S_NODE_36956_length_285_cov_1.233051_g36007_i0 PRJNA699078 36956 285 1.233051 3.51419535 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 84.7 4.15e-18   NR MBI1978359.1 2035772 g36007 i0 51.6 2.93684210526316 93 38 97.9 2 2 280 96 181 MBI1978359.1 DJ-1/PfpI family protein [Candidatus Omnitrophota bacterium] diamond 837 84.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26893111 26893111 PRJNA699078_S_NODE_38641_length_278_cov_2.043668_g37692_i0 PRJNA699078 38641 278 2.043668 5.68139704 Lentisphaeria bacterium 2053569 Bacteria Bacteria 66.6 7.56e-12   NR MBO7147636.1 2053569 g37692 i0 37.1 1.89928057553957 89 56 96 0 10 276 9 97 MBO7147636.1 hypothetical protein [Lentisphaeria bacterium] diamond 528 66.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27335714 27335714 PRJNA699078_S_NODE_55303_length_229_cov_1.466667_g54354_i0 PRJNA699078 55303 229 1.466667 3.35866743 Rhodopirellula sallentina 1263869 Bacteria Bacteria 93.2 2.88e-20   NR WP_085979993.1 1263869 g54354 i0 69.5 1.54585152838428 59 18 77.3 0 1 177 308 366 WP_085979993.1 cis-3-hydroxy-L-proline dehydratase [Rhodopirellula sallentina] diamond 354 93.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rhodopirellula Rhodopirellula sallentina
27556437 27556437 PRJNA699078_S_NODE_11084_length_462_cov_6.135593_g10169_i0 PRJNA699078 11084 462 6.135593 28.34643966 Planctomycetota bacterium 2026780 Bacteria Bacteria 147 3.31e-40   NR MEI8371948.1 2026780 g10169 i0 56.1 5.31168831168831 132 58 85.7 0 422 27 193 324 MEI8371948.1 hypothetical protein [Planctomycetota bacterium] diamond 2454 147 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27714953 27714953 PRJNA699078_S_NODE_109524_length_156_cov_2.429907_g108575_i0 PRJNA699078 109524 156 2.429907 3.79065492 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 62 1.85e-9   NR MEC8928922.1 2026799 g108575 i0 54 4.98076923076923 50 23 96.2 0 150 1 509 558 MEC8928922.1 arginine--tRNA ligase [Verrucomicrobiota bacterium] diamond 777 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29798307 29798307 PRJNA699078_S_NODE_105211_length_164_cov_0.904348_g104262_i0 PRJNA699078 105211 164 0.904348 1.48313072 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.7 0.0125   NR MDQ6626063.1 2026799 g104262 i0 46.2 0.713414634146341 39 21 71.3 0 14 130 43 81 MDQ6626063.1 sulfotransferase domain-containing protein [Verrucomicrobiota bacterium] diamond 117 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30473191 30473191 PRJNA699078_S_NODE_21493_length_363_cov_4.426752_g20544_i0 PRJNA699078 21493 363 4.426752 16.06910976 Pseudomonadati 3379134 Bacteria Bacteria 77.8 3.3e-14   NR MBL9129324.1 2026801 g20544 i0 37 4.05785123966942 100 59 80.2 3 363 73 63 161 MBL9129324.1 redoxin domain-containing protein [Verrucomicrobiales bacterium] diamond 1473 77.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30682866 30682866 PRJNA699078_S_NODE_31493_length_307_cov_3.065891_g30544_i0 PRJNA699078 31493 307 3.065891 9.41228537 Chlamydiales bacterium 2047757 Bacteria Bacteria 43.5 0.0416   NR MFI5343144.1 2047757 g30544 i0 31.3 0.625407166123778 64 43 62.5 1 260 69 173 235 MFI5343144.1 type IV secretion system protein TraC [Chlamydiales bacterium] diamond 192 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31283326 31283326 PRJNA699078_S_NODE_65855_length_208_cov_1.503145_g64906_i0 PRJNA699078 65855 208 1.503145 3.1265416 Planctomycetes bacterium RIFCSPLOWO2_12_38_17 1801946 Bacteria Bacteria 42.7 0.0243   NR OHB98512.1 1801946 g64906 i0 29.6 0.778846153846154 54 38 77.9 0 47 208 84 137 OHB98512.1 MAG: hypothetical protein A2W74_07070 [Planctomycetes bacterium RIFCSPLOWO2_12_38_17] diamond 162 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium RIFCSPLOWO2_12_38_17
31326229 31326229 PRJNA699078_S_NODE_95615_length_170_cov_2.231405_g94666_i0 PRJNA699078 95615 170 2.231405 3.7933885 Bacteria 2 Bacteria Bacteria 59.3 1.74e-8   NR MEN9343412.1 2081524 g94666 i0 59.6 9 47 19 82.9 0 3 143 268 314 MEN9343412.1 thioredoxin reductase [Chlamydiota bacterium] diamond 1530 59.3 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31346795 31346795 PRJNA699078_S_NODE_34456_length_295_cov_1.268293_g33507_i0 PRJNA699078 34456 295 1.268293 3.74146435 Pirellulaceae bacterium 2699754 Bacteria Bacteria 68.2 6.35e-11   NR MDA7951408.1 2699754 g33507 i0 47.9 0.722033898305085 71 37 72.2 0 294 82 269 339 MDA7951408.1 asparaginase [Pirellulaceae bacterium] diamond 213 68.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
31473363 31473363 PRJNA699078_S_NODE_37536_length_282_cov_3.497854_g36587_i0 PRJNA699078 37536 282 3.497854 9.86394828 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 80.9 2.34e-15   NR MBG89631.1 2026801 g36587 i0 44.4 0.957446808510638 90 48 93.6 1 19 282 467 556 MBG89631.1 glutamine--tRNA ligase [Verrucomicrobiales bacterium] diamond 270 80.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32496957 32496957 PRJNA699078_S_NODE_98159_length_168_cov_2.184874_g97210_i0 PRJNA699078 98159 168 2.184874 3.67058832 PVC group 1783257 Bacteria Bacteria 73.9 1.14e-13   NR MBQ9788854.1 2053569 g97210 i0 59.6 4.67857142857143 52 21 92.9 0 9 164 319 370 MBQ9788854.1 type III PLP-dependent enzyme [Lentisphaeria bacterium] diamond 786 73.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;