RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA699078", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA699078 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28946180 28946180 PRJNA699078_S_NODE_23628_length_350_cov_1.524917_g22679_i0 PRJNA699078 23628 350 1.524917 5.3372095 Pleurocapsales cyanobacterium LEGE 06147 1828827 Bacteria Bacteria 144 3.03e-37   NR MBE9169993.1 1828827 g22679 i0 55.2 2.98285714285714 116 45 99.4 1 350 3 361 469 MBE9169993.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase [Pleurocapsales cyanobacterium LEGE 06147] diamond 1044 144 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Pleurocapsales     Pleurocapsales cyanobacterium LEGE 06147
30430656 30430656 PRJNA699078_S_NODE_65693_length_208_cov_2.125786_g64744_i0 PRJNA699078 65693 208 2.125786 4.42163488 Geminocystis sp. GBBB 2664100 Bacteria Bacteria 42.4 0.0329   NR WP_308254607.1 2604140 g64744 i0 28.1 0.923076923076923 64 46 92.3 0 207 16 435 498 WP_308254607.1 group II intron reverse transcriptase/maturase [Geminocystis sp. GBBB08] diamond 192 42.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Geminocystis Geminocystis sp. GBBB08
31251736 31251736 PRJNA699078_S_NODE_56595_length_226_cov_1.491525_g55646_i0 PRJNA699078 56595 226 1.491525 3.3708465 Cyanobacteria bacterium J06638_20 3023208 Bacteria Bacteria 48.9 1.89e-4   NR MEO1211654.1 3023208 g55646 i0 36.4 0.730088495575221 55 35 73 0 176 12 333 387 MEO1211654.1 reverse transcriptase family protein [Cyanobacteria bacterium J06638_20] diamond 165 48.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium J06638_20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;