RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA699078" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA699078 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
681741 681741 PRJNA699078_S_NODE_103581_length_165_cov_0.896552_g102632_i0 PRJNA699078 103581 165 0.896552 1.4793108 Patescibacteria group bacterium 2052139 Bacteria Bacteria 54.7 0.004   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g102632 i0 100 0.175757575757576 29 0 18 0 43 71 1045205 1045233 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26670906 26670906 PRJNA699078_S_NODE_57581_length_224_cov_1.188571_g56632_i0 PRJNA699078 57581 224 1.188571 2.66239904 Candidatus Babeliaceae bacterium 2545253 Bacteria Bacteria 66.6 1.08e-10   NR MFA6066069.1 2545253 g56632 i0 43.4 2.07589285714286 76 39 96.4 1 223 8 159 234 MFA6066069.1 metallophosphoesterase [Candidatus Babeliaceae bacterium] diamond 465 66.6 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae   Candidatus Babeliaceae bacterium
26967304 26967304 PRJNA699078_S_NODE_49442_length_243_cov_3.175258_g48493_i0 PRJNA699078 49442 243 3.175258 7.71587694 Bacteria 2 Bacteria Bacteria 49.3 9.63e-5   NR MCS7240361.1 2306012 g48493 i0 37.2 2.18518518518519 94 39 98.8 3 3 242 79 166 MCS7240361.1 phosphatase PAP2 family protein [Candidatus Bipolaricaulota bacterium] diamond 531 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
29734971 29734971 PRJNA699078_S_NODE_29630_length_316_cov_4.254682_g28681_i0 PRJNA699078 29630 316 4.254682 13.44479512 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.5 0.0473   NR MFA5967500.1 2052139 g28681 i0 40 0.474683544303797 50 28 45.6 1 265 122 647 696 MFA5967500.1 hypothetical protein [Patescibacteria group bacterium] diamond 150 43.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31884333 31884333 PRJNA699078_S_NODE_27717_length_326_cov_3.415162_g26768_i0 PRJNA699078 27717 326 3.415162 11.13342812 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 103 7.42e-24   NR MBP6989266.1 2053613 g26768 i0 54.7 1.54601226993865 86 38 78.2 1 5 259 233 318 MBP6989266.1 thioredoxin-disulfide reductase [Candidatus Shapirobacteria bacterium] diamond 504 103 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;