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contig_metadata

21 rows where bioproject = "PRJNA699078" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA699078 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7060903 7060903 PRJNA699078_S_NODE_49746_length_242_cov_13.393782_g48797_i0 PRJNA699078 49746 242 13.393782 32.41295244 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 150 7.509999999999998e-32   NTclustered gi|470392114|ref|XM_004334697.1| 1257118 g48797 i0 94.792 31.0330578512397 96 5 40 0 30 125 1204 1299 Acanthamoeba castellanii str. Neff GTPase domain containing protein (ACA1_092650), partial mRNA blastn 7510 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9610173 9610173 PRJNA699078_S_NODE_106748_length_163_cov_0.912281_g105799_i0 PRJNA699078 106748 163 0.912281 1.48701803 Acytostelium subglobosum 361139 Evosea other_Eukaryota 145 2.18e-30   NTclustered gi|831754863|ref|XM_012892787.1| 1410327 g105799 i0 83.125 31.6687116564417 160 25 98 2 4 162 396 238 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 5162 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10885822 10885822 PRJNA699078_S_NODE_108469_length_162_cov_0.902655_g107520_i0 PRJNA699078 108469 162 0.902655 1.4623011 Mastigella eilhardi 1580584 Evosea other_Eukaryota 165 1.66e-36   NTclustered gi|730326679|gb|KJ879560.1| 1580584 g107520 i0 85.185 88.6666666666667 162 22 99 2 2 162 638 478 Mastigella eilhardi strain GO7 actin gene, partial cds blastn 14364 165 1 Eukaryota Amoebozoa   Evosea   Pelobiontida   Mastigella Mastigella eilhardi
12161322 12161322 PRJNA699078_S_NODE_37430_length_283_cov_1.538462_g36481_i0 PRJNA699078 37430 283 1.538462 4.35384746 Heterostelium album 2086695 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|1160573700|ref|XM_020577028.1| 670386 g36481 i0 94.595 0.452296819787986 37 1 13 1 155 190 547 583 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 128 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
22359635 22359635 PRJNA699078_S_NODE_57418_length_224_cov_1.782857_g56469_i0 PRJNA699078 57418 224 1.782857 3.99359968 Dictyostelium purpureum 5786 Evosea other_Eukaryota 58.4 4.28e-4   NTclustered gi|330796093|ref|XM_003286056.1| 5786 g56469 i0 94.737 0.169642857142857 38 1 17 1 79 115 405 368 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_150062), partial mRNA blastn 38 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26639545 26639545 PRJNA699078_S_NODE_64381_length_210_cov_4.546584_g63432_i0 PRJNA699078 64381 210 4.546584 9.5478264 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 51.2 2.44e-5   NR KYQ90135.1 361077 g63432 i0 46.8 6.34285714285714 47 25 67.1 0 3 143 760 806 KYQ90135.1 putative amino acid/polyamine transporter I [Tieghemostelium lacteum] diamond 1332 51.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
26956033 26956033 PRJNA699078_S_NODE_9742_length_484_cov_1.685057_g8836_i0 PRJNA699078 9742 484 1.685057 8.15567588 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 103 5.229999999999999e-23   NR XP_641686.1 352472 g8836 i0 40 6.24793388429752 155 93 96.1 0 476 12 52 206 XP_641686.1 protein kinase A regulatory subunit [Dictyostelium discoideum AX4] diamond 3024 103 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27240703 27240703 PRJNA699078_S_NODE_29423_length_317_cov_4.847015_g28474_i0 PRJNA699078 29423 317 4.847015 15.36503755 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 91.7 4.38e-19   NR KAH3745130.1 1580589 g28474 i0 41.9 2.02523659305994 105 55 93.7 2 315 19 323 427 KAH3745130.1 thymus-specific serine protease [Pelomyxa schiedti] diamond 642 91.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27903745 27903745 PRJNA699078_S_NODE_21045_length_366_cov_2.823344_g20096_i0 PRJNA699078 21045 366 2.823344 10.33343904 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.5 3.2e-10   NR XP_004338625.1 1257118 g20096 i0 40.4 0.467213114754098 57 34 46.7 0 6 176 47 103 XP_004338625.1 DUF614 family protein [Acanthamoeba castellanii str. Neff] diamond 171 63.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28061770 28061770 PRJNA699078_S_NODE_54305_length_231_cov_2.186813_g53356_i0 PRJNA699078 54305 231 2.186813 5.05153803 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 42.7 0.0328   NR XP_012749841.1 1410327 g53356 i0 35.6 0.948051948051948 73 27 94.8 2 228 10 314 366 XP_012749841.1 hypothetical protein SAMD00019534_105490 [Acytostelium subglobosum LB1] diamond 219 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28219474 28219474 PRJNA699078_S_NODE_97966_length_169_cov_0.866667_g97017_i0 PRJNA699078 97966 169 0.866667 1.46466723 Polysphondylium violaceum 133409 Evosea other_Eukaryota 57.8 1.94e-8   NR KAF2071651.1 133409 g97017 i0 42.9 2.80473372781065 56 31 99.4 1 2 169 101 155 KAF2071651.1 hypothetical protein CYY_007026 [Polysphondylium violaceum] diamond 474 57.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28598764 28598764 PRJNA699078_S_NODE_40827_length_270_cov_2.714932_g39878_i0 PRJNA699078 40827 270 2.714932 7.3303164 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 42.7 0.0385   NR XP_012756140.1 1410327 g39878 i0 41.7 0.666666666666667 60 33 64.4 1 3 176 145 204 XP_012756140.1 hypothetical protein SAMD00019534_041810 [Acytostelium subglobosum LB1] diamond 180 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28925442 28925442 PRJNA699078_S_NODE_70468_length_201_cov_1.026316_g69519_i0 PRJNA699078 70468 201 1.026316 2.06289516 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.9 0.00837   NR KAF2071795.1 133409 g69519 i0 52.5 3.65671641791045 40 17 59.7 1 193 74 185 222 KAF2071795.1 hypothetical protein CYY_006902 [Polysphondylium violaceum] diamond 735 44.3 0.99097065462754 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29388110 29388110 PRJNA699078_S_NODE_47029_length_250_cov_2.019900_g46080_i0 PRJNA699078 47029 250 2.0199 5.04975 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 2.96e-7   NR XP_004345828.1 1257118 g46080 i0 45.9 0.732 61 33 73.2 0 1 183 176 236 XP_004345828.1 Ras subfamily protein [Acanthamoeba castellanii str. Neff] diamond 183 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29482434 29482434 PRJNA699078_S_NODE_46270_length_252_cov_2.640394_g45321_i0 PRJNA699078 46270 252 2.640394 6.65379288 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 84 7.66e-17   NR KAH3756318.1 1580589 g45321 i0 50.7 4.27380952380952 69 34 82.1 0 207 1 287 355 KAH3756318.1 NAD-dependent epimerase/dehydratase family protein [Pelomyxa schiedti] diamond 1077 84 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29893351 29893351 PRJNA699078_S_NODE_58131_length_223_cov_1.080460_g57182_i0 PRJNA699078 58131 223 1.08046 2.4094258 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 59.3 4.06e-8   NR XP_004184997.1 370355 g57182 i0 43.3 0.807174887892377 60 34 80.7 0 9 188 1023 1082 XP_004184997.1 cation-transporting ATPase 13a1, putative [Entamoeba invadens IP1] diamond 180 59.3 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
30240742 30240742 PRJNA699078_S_NODE_31412_length_308_cov_1.154440_g30463_i0 PRJNA699078 31412 308 1.15444 3.5556752 Cavenderia fasciculata 261658 Evosea other_Eukaryota 57.4 5.5e-7   NR XP_004362528.1 261658 g30463 i0 42.9 1.28571428571429 63 35 61.4 1 12 200 390 451 XP_004362528.1 equilibrative nucleoside transporter family protein [Cavenderia fasciculata] diamond 396 57.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30240750 30240750 PRJNA699078_S_NODE_93152_length_173_cov_1.258065_g92203_i0 PRJNA699078 93152 173 1.258065 2.17645245 Cavenderia fasciculata 261658 Evosea other_Eukaryota 42 0.028   NR XP_004358781.1 261658 g92203 i0 43.8 0.832369942196532 48 26 81.5 1 24 164 5760 5807 XP_004358781.1 type A von Willebrand factor domain-containing protein [Cavenderia fasciculata] diamond 144 42 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30473196 30473196 PRJNA699078_S_NODE_50033_length_242_cov_1.347150_g49084_i0 PRJNA699078 50033 242 1.34715 3.260103 root 1 Root_unresolved Root_unresolved 66.6 5.61e-12   NR XP_638992.1 352472 g49084 i0 52.6 5.3801652892562 57 27 70.7 0 242 72 54 110 XP_638992.1 hypothetical protein DDB_G0283735 [Dictyostelium discoideum AX4] diamond 1302 67 0.994029850746269 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32611941 32611941 PRJNA699078_S_NODE_104480_length_164_cov_1.356522_g103531_i0 PRJNA699078 104480 164 1.356522 2.22469608 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 71.6 8.03e-13   NR KAH3756158.1 1580589 g103531 i0 61.1 1.97560975609756 54 21 98.8 0 1 162 381 434 KAH3756158.1 ribosomal protein L3 [Pelomyxa schiedti] diamond 324 71.6 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32674710 32674710 PRJNA699078_S_NODE_17900_length_389_cov_6.088235_g16953_i0 PRJNA699078 17900 389 6.088235 23.68323415 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 77.8 1.08e-13   NR KAH3760666.1 1580589 g16953 i0 39.6 2.40616966580977 101 60 77.9 1 44 346 649 748 KAH3760666.1 [FeFe]-hydrogenase [Pelomyxa schiedti] diamond 936 77.8 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;