RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA698538" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 4 ✖

bioproject 1

  • PRJNA698538 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5785048 5785048 PRJNA698538_S_NODE_6965_length_381_cov_3.727273_g6799_i0 PRJNA698538 6965 381 3.727273 14.20091013 Natronosalvus amylolyticus 2961994 Archaea Archaea 52.8 0.036   NTclustered gi|2273560669|gb|CP101156.1| 2961994 g6799 i0 100 0.073490813648294 28 0 7 0 354 381 2985907 2985880 Natronosalvus amylolyticus strain WLHSJ1 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronosalvus Natronosalvus amylolyticus
28787842 28787842 PRJNA698538_S_NODE_2107_length_518_cov_2.626966_g1943_i0 PRJNA698538 2107 518 2.626966 13.60768388 Thermoproteota archaeon 2056631 Archaea Archaea 70.9 9.71e-11   NR MEE6246046.1 2056631 g1943 i0 29.5 2.02702702702703 176 108 96.7 3 12 512 196 364 MEE6246046.1 CTP synthase [Thermoproteota archaeon] diamond 1050 70.9 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30872566 30872566 PRJNA698538_S_NODE_23954_length_263_cov_2.505263_g23788_i0 PRJNA698538 23954 263 2.505263 6.58884169 Methanobacterium sp. 2164 Archaea Archaea 52.4 1.87e-5   NR MEN6552012.1 2164 g23788 i0 35.6 1.77946768060836 90 47 97 3 261 7 87 170 MEN6552012.1 hypothetical protein [Methanobacterium sp.] diamond 468 52.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
32401995 32401995 PRJNA698538_S_NODE_10359_length_346_cov_3.384615_g10193_i0 PRJNA698538 10359 346 3.384615 11.7107679 Nanobdellati 1783276 Archaea Archaea 62.8 7.26e-9   NR MBU4242070.1 2026764 g10193 i0 42.9 1.66473988439306 63 36 54.6 0 336 148 215 277 MBU4242070.1 nucleoside phosphorylase [Nanoarchaeota archaeon] diamond 576 63.2 0.993670886075949 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;