RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA698538" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA698538 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17259112 17259112 PRJNA698538_S_NODE_12294_length_331_cov_1.751938_g12128_i0 PRJNA698538 12294 331 1.751938 5.79891478 Thamnocephalis sphaerospora 78915 Fungi Fungi 112 1.6899999999999999e-28   NR RKP08891.1 78915 g12128 i0 70.7 0.6797583081571 75 22 68 0 330 106 138 212 RKP08891.1 ras family-domain-containing protein [Thamnocephalis sphaerospora] diamond 225 112 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora
27714945 27714945 PRJNA698538_S_NODE_24224_length_262_cov_2.031746_g24058_i0 PRJNA698538 24224 262 2.031746 5.32317452 Piptocephalis tieghemiana 1286916 Fungi Fungi 73.9 3.87e-13   NR KAI9230438.1 1286916 g24058 i0 38.8 1.83206106870229 80 49 91.6 0 261 22 289 368 KAI9230438.1 MAG: hypothetical protein DHS80DRAFT_28885 [Piptocephalis tieghemiana] diamond 480 73.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis tieghemiana
32800675 32800675 PRJNA698538_S_NODE_12980_length_326_cov_1.826087_g12814_i0 PRJNA698538 12980 326 1.826087 5.95304362 Dispira parvispora 1520584 Fungi Fungi 70.1 4.16e-12   NR KAJ1965363.1 1520584 g12814 i0 49.3 2.37423312883436 67 33 61.7 1 257 57 128 193 KAJ1965363.1 hypothetical protein IWQ62_002684 [Dispira parvispora] diamond 774 70.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;