RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA698538" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA698538 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28345964 28345964 PRJNA698538_S_NODE_18786_length_290_cov_1.433180_g18620_i0 PRJNA698538 18786 290 1.43318 4.156222 Cystobacter fuscus 43 Bacteria Bacteria 53.9 1.87e-6   NR WP_095984829.1 43 g18620 i0 44.3 1.43793103448276 70 37 71.4 2 209 3 17 85 WP_095984829.1 hypothetical protein [Cystobacter fuscus] diamond 417 53.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
31662804 31662804 PRJNA698538_S_NODE_24917_length_259_cov_1.241935_g24751_i0 PRJNA698538 24917 259 1.241935 3.21661165 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.4 0.00493   NR RLB60749.1 2026735 g24751 i0 48.9 0.521235521235521 45 23 52.1 0 103 237 175 219 RLB60749.1 MAG: hypothetical protein DRI90_12965, partial [Deltaproteobacteria bacterium] diamond 135 45.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;