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contig_metadata

15 rows where bioproject = "PRJNA698538" and tax_clade = "Sar"

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tax_phylum 4

analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA698538 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5784701 5784701 PRJNA698538_S_NODE_12145_length_332_cov_2.652510_g11979_i0 PRJNA698538 12145 332 2.65251 8.8063332 Chromera velia 505693 SAR_Eukaryotes SAR_Eukaryotes 119 3.04e-22   NTclustered gi|157065025|gb|EU106870.1| 505693 g11979 i0 93.75 568.262048192771 80 3 24 2 254 332 2442 2520 Chromera velia large subunit ribosomal RNA gene, partial sequence blastn 188663 119 1 Eukaryota Sar         Chromeraceae Chromera Chromera velia
7060017 7060017 PRJNA698538_S_NODE_2606_length_486_cov_88.266344_g2440_i0 PRJNA698538 2606 486 88.266344 428.97443184 Hematodinium sp. 173654 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.047   NTclustered gi|357196844|emb|HE610736.1| 173654 g2440 i0 100 0.0576131687242798 28 0 6 0 1 28 2 29 Hematodinium sp. mitochondrial partial small subunit ribosomal RNA (ssu rRNA gene), clone 16 blastn 28 52.8 1 Eukaryota Sar     Dinophyceae Syndiniales Syndiniaceae Hematodinium Hematodinium sp.
7060079 7060079 PRJNA698538_S_NODE_30486_length_238_cov_2.054545_g30320_i0 PRJNA698538 30486 238 2.054545 4.8898171 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|2742502725|gb|PP905714.1| 447216 g30320 i0 100 0.235294117647059 28 0 12 0 1 28 1198 1225 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
12160402 12160402 PRJNA698538_S_NODE_13010_length_326_cov_1.118577_g12844_i0 PRJNA698538 13010 326 1.118577 3.64656102 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.031   NTclustered gi|820700576|tpe|LN714500.1| 432359 g12844 i0 100 0.0858895705521472 28 0 9 0 213 240 5764249 5764222 TPA_asm: Toxoplasma gondii VEG, chromosome chrX, complete genome blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
12160599 12160599 PRJNA698538_S_NODE_2550_length_490_cov_3.911271_g2384_i0 PRJNA698538 2550 490 3.911271 19.1652279 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.013   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g2384 i0 100 0.287755102040816 29 0 6 0 462 490 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
14710529 14710529 PRJNA698538_S_NODE_5612_length_400_cov_6.394495_g5446_i0 PRJNA698538 5612 400 6.394495 25.57798 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g5446 i0 100 0.2875 30 0 8 0 371 400 41 12 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 115 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
17259157 17259157 PRJNA698538_S_NODE_15614_length_309_cov_1.161017_g15448_i0 PRJNA698538 15614 309 1.161017 3.58754253 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 566 8.33e-157   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g15448 i0 99.676 20.9223300970874 309 1 100 0 1 309 949 1257 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 6465 566 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
17761879 17761879 PRJNA698538_S_NODE_22194_length_272_cov_1.934673_g22028_i0 PRJNA698538 22194 272 1.934673 5.26231056 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 76.3 8.78e-14   NR RHY78209.1 112090 g22028 i0 77.1 11.6360294117647 48 9 52.9 1 123 266 1221 1266 RHY78209.1 hypothetical protein DYB38_002210 [Aphanomyces astaci] diamond 3165 76.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
19808351 19808351 PRJNA698538_S_NODE_26116_length_253_cov_3.100000_g25950_i0 PRJNA698538 26116 253 3.1 7.843 Fragilidium sp. 2316360 SAR_Eukaryotes SAR_Eukaryotes 63.9 1.06e-5   NTclustered gi|2076757797|gb|MZ712997.1| 2316360 g25950 i0 100 13.9920948616601 34 0 13 0 1 34 638 605 Fragilidium sp. isolate FragDinoMRT2015_sp2 large subunit ribosomal RNA gene, partial sequence blastn 3540 63.9 1 Eukaryota Sar     Dinophyceae Gonyaulacales Pyrophacaceae Fragilidium Fragilidium sp.
22358501 22358501 PRJNA698538_S_NODE_19878_length_284_cov_1.672986_g19712_i0 PRJNA698538 19878 284 1.672986 4.75128024 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g19712 i0 100 0.0985915492957746 28 0 10 0 257 284 38 11 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
26766236 26766236 PRJNA698538_S_NODE_21061_length_278_cov_1.765854_g20895_i0 PRJNA698538 21061 278 1.765854 4.90907412 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 65.5 4e-10   NR XP_008604768.1 1156394 g20895 i0 47.2 0.776978417266187 72 37 76.6 1 276 64 233 304 XP_008604768.1 YjeF [Saprolegnia diclina VS20] diamond 216 65.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
27746321 27746321 PRJNA698538_S_NODE_9124_length_357_cov_4.338028_g8958_i0 PRJNA698538 9124 357 4.338028 15.48675996 Ectocarpus siliculosus 2880 SAR_Eukaryotes SAR_Eukaryotes 51.6 8.82e-5   NR CBJ32755.1 2880 g8958 i0 46.6 0.487394957983193 58 31 48.7 0 351 178 151 208 CBJ32755.1 conserved unknown protein [Ectocarpus siliculosus] diamond 174 51.6 1 Eukaryota Sar     Phaeophyceae Ectocarpales Ectocarpaceae Ectocarpus Ectocarpus siliculosus
30062184 30062184 PRJNA698538_S_NODE_31531_length_227_cov_3.467532_g31365_i0 PRJNA698538 31531 227 3.467532 7.87129764 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.52e-4   NR DBA01320.1 4803 g31365 i0 49.1 8.08810572687225 53 25 67.4 1 4 156 221 273 DBA01320.1 TPA: hypothetical protein N0F65_001825, partial [Lagenidium giganteum] diamond 1836 49.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30694220 30694220 PRJNA698538_S_NODE_6553_length_386_cov_4.019169_g6387_i0 PRJNA698538 6553 386 4.019169 15.51399234 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 148 5.45e-39   NR KAK1936482.1 32595 g6387 i0 77.3 15.0388601036269 97 21 75.4 1 385 95 513 608 KAK1936482.1 putative peptidyl-prolyl cis-trans isomerase [Babesia divergens] diamond 5805 149 0.993288590604027 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia divergens
32085377 32085377 PRJNA698538_S_NODE_32338_length_206_cov_4.631579_g32172_i0 PRJNA698538 32338 206 4.631579 9.54105274 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 72 3.54e-13   NR SCM25234.1 5826 g32172 i0 45.6 4.95145631067961 68 37 99 0 1 204 159 226 SCM25234.1 diphthine--ammonia ligase, putative [Plasmodium chabaudi adami] diamond 1020 72 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;