RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA698538" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA698538 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8334382 8334382 PRJNA698538_S_NODE_11227_length_339_cov_3.097744_g11061_i0 PRJNA698538 11227 339 3.097744 10.50135216 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 62 6.84e-10   NR PID29309.1 2026720 g11061 i0 68.8 0.814159292035398 48 15 42.5 0 168 311 2 49 PID29309.1 MAG: gas vesicle protein [Candidatus Saccharibacteria bacterium] diamond 276 62 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
26829669 26829669 PRJNA698538_S_NODE_23501_length_265_cov_4.187500_g23335_i0 PRJNA698538 23501 265 4.1875 11.096875 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 50.4 6.37e-5   NR NTU46887.1 2282149 g23335 i0 73.3 0.339622641509434 30 8 34 0 175 264 1 30 NTU46887.1 uracil-DNA glycosylase [Candidatus Roizmanbacteria bacterium] diamond 90 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;