RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA695273" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695273 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
676970 676970 PRJNA695273_P_NODE_135181_length_248_cov_1.262857_g134423_i0 PRJNA695273 135181 248 1.262857 3.13188536 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 278 3.4e-70   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g134423 i0 87.866 97.9838709677419 239 25 95 4 1 235 3831546 3831784 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 24300 278 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206
12156014 12156014 PRJNA695273_P_NODE_129150_length_250_cov_0.870056_g128392_i0 PRJNA695273 129150 250 0.870056 2.17514 FCB group 1783270 Bacteria Bacteria 105 1.0799999999999999e-24   NR WP_072714044.1 633813 g128392 i0 64.2 5.688 81 26 93.6 1 4 237 276 356 WP_072714044.1 glycosyltransferase family 4 protein [Rhodothermus profundi] diamond 1422 106 0.990566037735849 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodothermus Rhodothermus profundi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;