RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA695273" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA695273 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10881554 10881554 PRJNA695273_P_NODE_157329_length_242_cov_0.911243_g156571_i0 PRJNA695273 157329 242 0.911243 2.20520806 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 351 1.92e-92   NTclustered gi|808354332|gb|CP011097.2| 1603555 g156571 i0 92.946 5.9504132231405 241 17 99 0 1 241 1612160 1612400 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 1440 351 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
26861515 26861515 PRJNA695273_P_NODE_156421_length_242_cov_0.911243_g155663_i0 PRJNA695273 156421 242 0.911243 2.20520806 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 72.4 2.6e-13   NR HSF00055.1 2169593 g155663 i0 86.1 1.33884297520661 36 5 44.6 0 2 109 181 216 HSF00055.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 324 72.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32643033 32643033 PRJNA695273_P_NODE_158140_length_241_cov_2.083333_g157382_i0 PRJNA695273 158140 241 2.083333 5.02083253 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 52.4 1.26e-5   NR HKG31001.1 2169593 g157382 i0 31.9 3.63485477178423 69 47 85.9 0 3 209 12 80 HKG31001.1 SDR family oxidoreductase [Nitrososphaeraceae archaeon] diamond 876 52.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;