RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA695273" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695273 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27367419 27367419 PRJNA695273_P_NODE_135603_length_248_cov_0.880000_g134845_i0 PRJNA695273 135603 248 0.88 2.1824 Chlamydiia bacterium 2052156 Bacteria Bacteria 88.2 1.03e-18   NR MCB1113679.1 2052156 g134845 i0 52.6 0.943548387096774 78 35 91.9 1 231 4 35 112 MCB1113679.1 phosphatidylserine decarboxylase [Chlamydiia bacterium] diamond 234 88.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
31473316 31473316 PRJNA695273_P_NODE_36316_length_451_cov_1.153439_g35558_i0 PRJNA695273 36316 451 1.153439 5.20200989 Chlamydiota bacterium 2081524 Bacteria Bacteria 90.1 1.39e-18   NR MBI1883396.1 2081524 g35558 i0 41.6 0.751662971175166 113 65 75.2 1 340 2 21 132 MBI1883396.1 pyrroline-5-carboxylate reductase [Chlamydiota bacterium] diamond 339 90.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;