RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA695273" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695273 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1955408 1955408 PRJNA695273_P_NODE_99282_length_280_cov_2.386473_g98524_i0 PRJNA695273 99282 280 2.386473 6.6821244 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 139 9.16e-41   NR KNE59758.1 578462 g98524 i0 80.2 5.22857142857143 81 16 86.8 0 245 3 1 81 KNE59758.1 60S ribosomal protein L37a [Allomyces macrogynus ATCC 38327] diamond 1464 139 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
30651119 30651119 PRJNA695273_P_NODE_160053_length_241_cov_0.916667_g159295_i0 PRJNA695273 160053 241 0.916667 2.20916747 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 85.1 4.51e-17   NR KAI9187553.1 1313167 g159295 i0 51.3 1.99170124481328 80 39 99.6 0 1 240 426 505 KAI9187553.1 3',5'-cyclic-nucleotide phosphodiesterase [Blastocladiella emersonii ATCC 22665] diamond 480 85.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;