RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA695273" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA695273 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4505928 4505928 PRJNA695273_P_NODE_27144_length_528_cov_1.846154_g26389_i0 PRJNA695273 27144 528 1.846154 9.74769312 Ralstonia phage 1 NP-2014 1460070 Viruses Viruses 516 1.53e-141   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g26389 i0 84.483 2.42234848484848 522 81 99 0 1 522 6048 6569 Ralstonia phage 1 NP-2014, complete sequence blastn 1279 516 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014
5780017 5780017 PRJNA695273_P_NODE_115345_length_262_cov_1.629630_g114587_i0 PRJNA695273 115345 262 1.62963 4.2696306 Inoviridae sp. 2219103 Viruses Viruses 411 3.419999999999999e-110   NTclustered gi|2056866535|tpg|BK044602.1| 2219103 g114587 i0 95.038 3.11068702290076 262 12 100 1 1 262 46525 46785 MAG TPA_asm: Inoviridae sp. isolate ct5hk1, partial genome blastn 815 411 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
23630795 23630795 PRJNA695273_P_NODE_34499_length_463_cov_2.105128_g33741_i0 PRJNA695273 34499 463 2.105128 9.74674264 Psecadovirus PSH1 2011088 Viruses Viruses 665 0   NTclustered gi|170783404|ref|NC_010429.1| 2011087 g33741 i0 92.672 9.1317494600432 464 31 100 3 1 463 6405 5944 Stenotrophomonas phage PSH1, complete sequence blastn 4228 665 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Psecadovirus Psecadovirus PSH1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;