RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA695273", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA695273 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10881676 10881676 PRJNA695273_P_NODE_162449_length_231_cov_2.791139_g161691_i0 PRJNA695273 162449 231 2.791139 6.44753109 Mitosporidium daphniae 1485682 Fungi Fungi 87 2.59e-18   NR XP_013239209.1 1485682 g161691 i0 74.5 4.03896103896104 51 13 66.2 0 229 77 260 310 XP_013239209.1 mitochondrial phosphate carrier protein 2 [Mitosporidium daphniae] diamond 933 87 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
29419321 29419321 PRJNA695273_P_NODE_146769_length_245_cov_0.895349_g146011_i0 PRJNA695273 146769 245 0.895349 2.19360505 Nematocida parisii ERTm3 935791 Fungi Fungi 47.8 6.48e-4   NR EIJ88666.1 935791 g146011 i0 43.9 1.02857142857143 41 23 50.2 0 9 131 476 516 EIJ88666.1 WNK protein kinase [Nematocida parisii ERTm3] diamond 252 47.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii
31726087 31726087 PRJNA695273_P_NODE_139157_length_247_cov_0.885057_g138399_i0 PRJNA695273 139157 247 0.885057 2.18609079 Vittaforma corneae ATCC 5 42399 Fungi Fungi 58.2 1.4e-7   NR XP_007603761.1 993615 g138399 i0 43.9 1.54251012145749 57 31 69.2 1 229 59 124 179 XP_007603761.1 uncharacterized protein VICG_00308 [Vittaforma corneae ATCC 50505] diamond 381 58.2 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;