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contig_metadata

21 rows where bioproject = "PRJNA695273" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 21 ✖

bioproject 1

  • PRJNA695273 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2458167 2458167 PRJNA695273_P_NODE_51662_length_378_cov_7.668852_g50904_i0 PRJNA695273 51662 378 7.668852 28.98826056 Eukaryota 2759 Plants Plants 699 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g50904 i0 100 99.7619047619048 378 0 100 0 1 378 496 873 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 37710 699 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
5780699 5780699 PRJNA695273_P_NODE_144345_length_246_cov_0.890173_g143587_i0 PRJNA695273 144345 246 0.890173 2.18982558 Chlamydomonas reinhardtii 3055 Plants Plants 60.2 1.33e-4   NTclustered gi|2082236579|ref|XM_043058545.1| 3055 g143587 i0 97.143 9.03658536585366 35 1 14 0 198 232 4941 4907 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g025551v5), mRNA blastn 2223 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
7559807 7559807 PRJNA695273_P_NODE_123406_length_252_cov_11.810056_g122648_i0 PRJNA695273 123406 252 11.810056 29.76134112 Eukaryota 2759 Plants Plants 466 6.89e-127   NTclustered gi|1201359270|gb|MF040792.1| 3078 g122648 i0 100 99.9960317460317 252 0 100 0 1 252 109 360 Auxenochlorella pyrenoidosa isolate HIT9 18S ribosomal RNA gene, partial sequence blastn 25199 466 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
12158199 12158199 PRJNA695273_P_NODE_81590_length_306_cov_1.313305_g80832_i0 PRJNA695273 81590 306 1.313305 4.0187133 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.029   NTclustered gi|2082270981|ref|XM_043072608.1| 3055 g80832 i0 100 0.0915032679738562 28 0 9 0 264 291 4753 4780 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_17g739050v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13936327 13936327 PRJNA695273_P_NODE_163231_length_218_cov_6.572414_g162473_i0 PRJNA695273 163231 218 6.572414 14.32786252 Eukaryota 2759 Plants Plants 403 4.62e-108   NTclustered gi|1898545223|gb|MT951391.1| 3078 g162473 i0 100 99.9678899082569 218 0 100 0 1 218 1397 1614 Auxenochlorella pyrenoidosa strain Ozcimen001 small subunit ribosomal RNA gene, partial sequence blastn 21793 403 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
14708190 14708190 PRJNA695273_P_NODE_89492_length_292_cov_1.041096_g88734_i0 PRJNA695273 89492 292 1.041096 3.04000032 Auxenochlorella protothecoides 3075 Plants Plants 130 1.22e-25   NTclustered gi|760445578|ref|XM_011401556.1| 3075 g88734 i0 88.679 2.83904109589041 106 12 36 0 153 258 105 210 Auxenochlorella protothecoides 40S ribosomal protein S11 partial mRNA blastn 829 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
15980768 15980768 PRJNA695273_P_NODE_39613_length_431_cov_1.695531_g38855_i0 PRJNA695273 39613 431 1.695531 7.30773861 Chlorellaceae 35461 Plants Plants 170 4.68e-50   NR XP_011401579.1 3075 g38855 i0 84.3 10.7331786542923 102 16 71 0 431 126 148 249 XP_011401579.1 putative histone H2A variant 3 [Auxenochlorella protothecoides] diamond 4626 170 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
17760815 17760815 PRJNA695273_P_NODE_58434_length_357_cov_8.288732_g57676_i0 PRJNA695273 58434 357 8.288732 29.59077324 Eukaryota 2759 Plants Plants 94.4 2.92e-22   NR CAD7699363.1 121088 g57676 i0 71.6 6.22689075630252 67 19 56.3 0 28 228 1 67 CAD7699363.1 unnamed protein product [Ostreobium quekettii] diamond 2223 95.1 0.992639327024185 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
21081495 21081495 PRJNA695273_P_NODE_85657_length_298_cov_2.382222_g84899_i0 PRJNA695273 85657 298 2.382222 7.09902156 Helicosporidium sp. ATCC 5 1907511 Plants Plants 112 8.26e-29   NR KDD75394.1 1291522 g84899 i0 57.1 1.71140939597315 84 36 84.6 0 257 6 11 94 KDD75394.1 Ras family protein [Helicosporidium sp. ATCC 50920] diamond 510 112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
21584286 21584286 PRJNA695273_P_NODE_132977_length_249_cov_0.875000_g132219_i0 PRJNA695273 132977 249 0.875 2.17875 Scenedesmaceae 3086 Plants Plants 126 8.769999999999998e-32   NR WIA38262.1 3088 g132219 i0 72.6 3.02409638554217 84 22 100 1 1 249 380 463 WIA38262.1 hypothetical protein OEZ86_001602 [Tetradesmus obliquus] diamond 753 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
26650558 26650558 PRJNA695273_P_NODE_34901_length_460_cov_2.881137_g34143_i0 PRJNA695273 34901 460 2.881137 13.2532302 Eukaryota 2759 Plants Plants 88.6 3.89e-17   NR XP_011399055.1 3075 g34143 i0 57.5 21.3391304347826 73 31 47.6 0 86 304 541 613 XP_011399055.1 FACT complex subunit SSRP1 [Auxenochlorella protothecoides] diamond 9816 89.4 0.991051454138702 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
27114086 27114086 PRJNA695273_P_NODE_154742_length_242_cov_2.278107_g153984_i0 PRJNA695273 154742 242 2.278107 5.51301894 Ostreobium quekettii 121088 Plants Plants 141 7.679999999999999e-37   NR CAD7699859.1 121088 g153984 i0 85 6.94214876033058 80 12 99.2 0 240 1 505 584 CAD7699859.1 unnamed protein product [Ostreobium quekettii] diamond 1680 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
27536344 27536344 PRJNA695273_P_NODE_156863_length_242_cov_0.911243_g156105_i0 PRJNA695273 156863 242 0.911243 2.20520806 Eukaryota 2759 Plants Plants 82.4 4.52e-18   NR PRW20803.1 3076 g156105 i0 57.3 35.1818181818182 75 32 93 0 1 225 49 123 PRW20803.1 60S ribosomal L35-like [Chlorella sorokiniana] diamond 8514 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
27556360 27556360 PRJNA695273_P_NODE_100504_length_279_cov_1.495146_g99746_i0 PRJNA695273 100504 279 1.495146 4.17145734 Bryopsis sp. KO-2 3115439 Plants Plants 82.4 6.66e-16   NR GMH45333.1 3041901 g99746 i0 47.8 0.967741935483871 90 46 96.8 1 4 273 333 421 GMH45333.1 hypothetical protein BSKO_13290 [Bryopsis sp. KO-2023] diamond 270 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
27714920 27714920 PRJNA695273_P_NODE_95324_length_285_cov_1.320755_g94566_i0 PRJNA695273 95324 285 1.320755 3.76415175 Pedinophyceae sp. YPF-7 765719 Plants Plants 89 1.24e-18   NR CAG9465155.1 765719 g94566 i0 61.8 0.715789473684211 68 26 71.6 0 81 284 14 81 CAG9465155.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 204 89 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
29766650 29766650 PRJNA695273_P_NODE_152151_length_243_cov_0.905882_g151393_i0 PRJNA695273 152151 243 0.905882 2.20129326 Scenedesmus sp. PABB 2909984 Plants Plants 81.3 1.07e-15   NR KAF8061075.1 2742167 g151393 i0 65.2 1.64197530864198 69 17 85.2 1 243 37 169 230 KAF8061075.1 PRP31 [Scenedesmus sp. PABB004] diamond 399 81.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
30304312 30304312 PRJNA695273_P_NODE_134752_length_248_cov_1.760000_g133994_i0 PRJNA695273 134752 248 1.76 4.3648 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 47.8 4.56e-4   NR KAF6263591.1 2650976 g133994 i0 64.5 0.375 31 11 37.5 0 219 127 2 32 KAF6263591.1 hypothetical protein COO60DRAFT_1624524 [Scenedesmus sp. NREL 46B-D3] diamond 93 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
31484622 31484622 PRJNA695273_P_NODE_106716_length_272_cov_1.547739_g105958_i0 PRJNA695273 106716 272 1.547739 4.20985008 Eukaryota 2759 Plants Plants 46.2 0.00309   NR KAI3438539.1 3077 g105958 i0 45.3 2.72426470588235 53 29 58.5 0 3 161 381 433 KAI3438539.1 hypothetical protein D9Q98_000967 [Chlorella vulgaris] diamond 741 46.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
32042575 32042575 PRJNA695273_P_NODE_130078_length_250_cov_0.870056_g129320_i0 PRJNA695273 130078 250 0.870056 2.17514 Chlorella ohadii 2649997 Plants Plants 42.7 0.0416   NR KAI7841105.1 2649997 g129320 i0 37.9 0.696 58 33 69.6 2 189 16 488 542 KAI7841105.1 hypothetical protein COHA_005330 [Chlorella ohadii] diamond 174 42.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella ohadii
32053765 32053765 PRJNA695273_P_NODE_62498_length_346_cov_2.717949_g61740_i0 PRJNA695273 62498 346 2.717949 9.40410354 Eukaryota 2759 Plants Plants 124 1.15e-33   NR KAF5836119.1 3046 g61740 i0 52.4 10.8294797687861 126 45 96.2 2 345 13 25 150 KAF5836119.1 NAC domain-containing protein [Dunaliella salina] diamond 3747 125 0.992 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
32895095 32895095 PRJNA695273_P_NODE_154360_length_243_cov_0.905882_g153602_i0 PRJNA695273 154360 243 0.905882 2.20129326 Gonium pectorale 33097 Plants Plants 53.9 3.81e-6   NR KXZ48496.1 33097 g153602 i0 48.7 2.5679012345679 78 24 96.3 4 235 2 149 210 KXZ48496.1 hypothetical protein GPECTOR_27g666 [Gonium pectorale] diamond 624 53.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;