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contig_metadata

26 rows where bioproject = "PRJNA695273", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 26 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 26 ✖

bioproject 1

  • PRJNA695273 · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
676983 676983 PRJNA695273_P_NODE_135641_length_248_cov_0.880000_g134883_i0 PRJNA695273 135641 248 0.88 2.1824 Ostertagia ostertagi 6317 Nematoda Nematoda 120 3.939999999999999e-32   NR KAK6021056.1 6317 g134883 i0 98.8 0.991935483870968 82 1 99.2 0 248 3 14 95 KAK6021056.1 putative transcriptional regulatory protein afsQ1 [Ostertagia ostertagi] diamond 246 120 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
1953888 1953888 PRJNA695273_P_NODE_29182_length_507_cov_1.880184_g28425_i0 PRJNA695273 29182 507 1.880184 9.53253288 Metazoa 33208 Nematoda Nematoda 229 5.83e-68   NR UMM15022.1 6238 g28425 i0 67.4 80.2840236686391 144 47 85.2 0 74 505 287 430 UMM15022.1 hypothetical protein L5515_002614 [Caenorhabditis briggsae] diamond 40704 231 0.991341991341991 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
4506149 4506149 PRJNA695273_P_NODE_38904_length_435_cov_1.718232_g38146_i0 PRJNA695273 38904 435 1.718232 7.4743092 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 9.29e-23   NR KAH7726204.1 70226 g38146 i0 44.2 9.27586206896552 104 57 71.7 1 434 123 256 358 KAH7726204.1 small G-protein GPA3 [Aphelenchoides avenae] diamond 4035 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
4506250 4506250 PRJNA695273_P_NODE_44644_length_405_cov_3.240964_g43886_i0 PRJNA695273 44644 405 3.240964 13.1259042 Angiostrongylus cantonensis 6313 Nematoda Nematoda 229 4.11e-73   NR KAE9421938.1 6313 g43886 i0 83.6 0.992592592592593 134 22 99.3 0 2 403 56 189 KAE9421938.1 hypothetical protein Angca_004637, partial [Angiostrongylus cantonensis] diamond 402 229 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
5781726 5781726 PRJNA695273_P_NODE_47985_length_392_cov_0.965517_g47227_i0 PRJNA695273 47985 392 0.965517 3.78482664 Caenorhabditis elegans 6239 Nematoda Nematoda 472 2.43e-128   NTclustered gi|474805|emb|Z32683.1| 6239 g47227 i0 99.614 16.2040816326531 259 0 66 1 1 259 21034 20777 Caenorhabditis elegans Cosmid R07E5, complete sequence blastn 6352 472 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
7056330 7056330 PRJNA695273_P_NODE_21246_length_606_cov_3.245779_g20496_i0 PRJNA695273 21246 606 3.245779 19.66942074 Caenorhabditis elegans 6239 Nematoda Nematoda 822 0   NTclustered gi|1429284|emb|Z75954.1| 6239 g20496 i0 100 11.1848184818482 445 0 73 0 162 606 2230 1786 Caenorhabditis elegans Cosmid F58H1, complete sequence blastn 6778 822 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
13431779 13431779 PRJNA695273_P_NODE_3511_length_1653_cov_3.814557_g2076_i1 PRJNA695273 3511 1653 3.814557 63.05462721 Caenorhabditis elegans 6239 Nematoda Nematoda 1912 0   NTclustered gi|1429284|emb|Z75954.1| 6239 g2076 i1 99.524 36.805202661827 1051 4 64 1 1 1050 1786 736 Caenorhabditis elegans Cosmid F58H1, complete sequence blastn 60839 1912 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
14705164 14705164 PRJNA695273_P_NODE_101192_length_278_cov_1.770732_g100434_i0 PRJNA695273 101192 278 1.770732 4.92263496 Caenorhabditis elegans 6239 Nematoda Nematoda 468 2.14e-127   NTclustered gi|1429284|emb|Z75954.1| 6239 g100434 i0 100 2.44604316546763 253 0 91 0 1 253 480 732 Caenorhabditis elegans Cosmid F58H1, complete sequence blastn 680 468 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
15979466 15979466 PRJNA695273_P_NODE_127273_length_251_cov_0.865169_g126515_i0 PRJNA695273 127273 251 0.865169 2.17157419 Caenorhabditis elegans 6239 Nematoda Nematoda 464 2.47e-126   NTclustered gi|373219291|emb|FO080793.1| 6239 g126515 i0 100 5 251 0 100 0 1 251 16869 16619 Caenorhabditis elegans Cosmid F55A3, complete sequence blastn 1255 464 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
16484667 16484667 PRJNA695273_P_NODE_113293_length_264_cov_2.659686_g112535_i0 PRJNA695273 113293 264 2.659686 7.02157104 Metazoa 33208 Nematoda Nematoda 174 4.93e-39   NTclustered gi|76560692|gb|DQ145717.1| 52064 g112535 i0 92 46.6439393939394 125 8 47 2 12 135 593 716 Heterorhabditis marelatus 28S ribosomal RNA gene, partial sequence blastn 12314 174 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heterorhabditidae Heterorhabditis Heterorhabditis marelatus
17257144 17257144 PRJNA695273_P_NODE_92454_length_288_cov_1.432558_g91696_i0 PRJNA695273 92454 288 1.432558 4.12576704 Auanema sp. JU1783 2878363 Nematoda Nematoda 128 2.26e-35   NR CAI4224101.1 2878363 g91696 i0 76.1 0.916666666666667 88 6 91.7 1 13 276 40 112 CAI4224101.1 unnamed protein product [Auanema sp. JU1783] diamond 264 128 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
19804626 19804626 PRJNA695273_P_NODE_2436_length_2024_cov_3.201948_g2076_i0 PRJNA695273 2436 2024 3.201948 64.80742752 Caenorhabditis elegans 6239 Nematoda Nematoda 1912 0   NTclustered gi|1429284|emb|Z75954.1| 6239 g2076 i0 99.524 35.8917984189723 1051 4 52 1 975 2024 736 1786 Caenorhabditis elegans Cosmid F58H1, complete sequence blastn 72645 1912 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
21079560 21079560 PRJNA695273_P_NODE_141917_length_246_cov_1.329480_g141159_i0 PRJNA695273 141917 246 1.32948 3.2705208 Angiostrongylus cantonensis 6313 Nematoda Nematoda 145 4.769999999999999e-42   NR KAE9421939.1 6313 g141159 i0 88.9 0.98780487804878 81 9 98.8 0 3 245 7 87 KAE9421939.1 hypothetical protein Angca_004638, partial [Angiostrongylus cantonensis] diamond 243 145 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
22355109 22355109 PRJNA695273_P_NODE_23018_length_580_cov_3.816568_g22266_i0 PRJNA695273 23018 580 3.816568 22.1360944 Caenorhabditis elegans 6239 Nematoda Nematoda 959 0   NTclustered gi|2226399|emb|Z75956.1| 6239 g22266 i0 100 4.55689655172414 519 0 89 0 1 519 19932 19414 Caenorhabditis elegans Cosmid R31, complete sequence blastn 2643 959 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
26955954 26955954 PRJNA695273_P_NODE_112462_length_265_cov_2.364583_g111704_i0 PRJNA695273 112462 265 2.364583 6.26614495 Strongyloides ratti 34506 Nematoda Nematoda 60.5 2.6e-8   NR XP_024507785.1 34506 g111704 i0 37.8 0.837735849056604 74 39 78.1 2 263 57 22 93 XP_024507785.1 Chromo domain/shadow and Chromo domain-like and Chromo domain-containing protein [Strongyloides ratti] diamond 222 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
27777794 27777794 PRJNA695273_P_NODE_89764_length_291_cov_1.724771_g89006_i0 PRJNA695273 89764 291 1.724771 5.01908361 Ancylostoma ceylanicum 53326 Nematoda Nematoda 70.9 1.68e-13   NR EPB76564.1 53326 g89006 i0 72.9 0.494845360824742 48 13 49.5 0 259 116 21 68 EPB76564.1 hypothetical protein ANCCEY_04343 [Ancylostoma ceylanicum] diamond 144 70.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
27820591 27820591 PRJNA695273_P_NODE_124604_length_251_cov_1.696629_g123846_i0 PRJNA695273 124604 251 1.696629 4.25853879 Metazoa 33208 Nematoda Nematoda 45.1 0.00586   NR KAH7730870.1 70226 g123846 i0 48.7 2.45019920318725 39 20 46.6 0 115 231 9 47 KAH7730870.1 hypothetical protein AAVH_01919 [Aphelenchoides avenae] diamond 615 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
27872312 27872312 PRJNA695273_P_NODE_125505_length_251_cov_0.865169_g124747_i0 PRJNA695273 125505 251 0.865169 2.17157419 Necator americanus 51031 Nematoda Nematoda 120 1.29e-29   NR ETN79898.1 51031 g124747 i0 73.2 0.9800796812749 82 22 98 0 1 246 240 321 ETN79898.1 hypothetical protein NECAME_18058, partial [Necator americanus] diamond 246 120 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
29336032 29336032 PRJNA695273_P_NODE_161749_length_238_cov_2.139394_g160991_i0 PRJNA695273 161749 238 2.139394 5.09175772 Metazoa 33208 Nematoda Nematoda 111 1.7699999999999999e-28   NR MCP9266050.1 6287 g160991 i0 74 20.7226890756303 73 18 92 1 221 3 16 87 MCP9266050.1 Ras-related protein Rap-1b [Dirofilaria immitis] diamond 4932 111 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
29419357 29419357 PRJNA695273_P_NODE_88689_length_293_cov_1.377273_g87931_i0 PRJNA695273 88689 293 1.377273 4.03540989 Ostertagia ostertagi 6317 Nematoda Nematoda 158 3.0099999999999993e-43   NR KAK6029001.1 6317 g87931 i0 100 0.819112627986348 80 0 81.9 0 54 293 1 80 KAK6029001.1 kelch repeat protein, partial [Ostertagia ostertagi] diamond 240 158 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
29545648 29545648 PRJNA695273_P_NODE_89470_length_292_cov_1.054795_g88712_i0 PRJNA695273 89470 292 1.054795 3.0800014 Aphelenchoides fujianensis 1052528 Nematoda Nematoda 103 1.0999999999999998e-24   NR KAI6234212.1 1052528 g88712 i0 67.1 1.40753424657534 70 23 71.9 0 290 81 165 234 KAI6234212.1 Peroxiredoxin-6 [Aphelenchoides fujianensis] diamond 411 103 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides fujianensis
30462252 30462252 PRJNA695273_P_NODE_156933_length_242_cov_0.911243_g156175_i0 PRJNA695273 156933 242 0.911243 2.20520806 Necator americanus 51031 Nematoda Nematoda 110 1.48e-29   NR ETN81739.1 51031 g156175 i0 72.5 0.991735537190083 80 22 99.2 0 242 3 12 91 ETN81739.1 toxin-antitoxin system, antitoxin component, Xre family [Necator americanus] diamond 240 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
30473179 30473179 PRJNA695273_P_NODE_148793_length_244_cov_0.900585_g148035_i0 PRJNA695273 148793 244 0.900585 2.1974274 Metazoa 33208 Nematoda Nematoda 95.5 1.06e-21   NR KHN83513.1 6265 g148035 i0 63 12.9590163934426 81 7 99.6 1 2 244 15 72 KHN83513.1 DNA-directed RNA polymerase II subunit RPB3 [Toxocara canis] diamond 3162 96.3 0.991692627206646 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
31251688 31251688 PRJNA695273_P_NODE_48975_length_388_cov_1.361905_g48217_i0 PRJNA695273 48975 388 1.361905 5.2841914 Cooperia oncophora 27828 Nematoda Nematoda 229 2.81e-71   NR KAK6048272.1 27828 g48217 i0 89.1 0.997422680412371 129 14 99.7 0 387 1 299 427 KAK6048272.1 hypothetical protein COOONC_14223 [Cooperia oncophora] diamond 387 229 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
32454168 32454168 PRJNA695273_P_NODE_86939_length_296_cov_1.381166_g86181_i0 PRJNA695273 86939 296 1.381166 4.08825136 Angiostrongylus cantonensis 6313 Nematoda Nematoda 203 3.2200000000000005e-64   NR KAE9412359.1 6313 g86181 i0 100 0.993243243243243 98 0 99.3 0 294 1 53 150 KAE9412359.1 hypothetical protein Angca_007934, partial [Angiostrongylus cantonensis] diamond 294 203 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
32769199 32769199 PRJNA695273_P_NODE_162440_length_231_cov_2.924051_g161682_i0 PRJNA695273 162440 231 2.924051 6.75455781 Mesorhabditis belari 2138241 Nematoda Nematoda 62 1.07e-9   NR CAJ0963925.1 2138241 g161682 i0 77.1 4.09090909090909 35 8 45.5 0 1 105 138 172 CAJ0963925.1 unnamed protein product, partial [Mesorhabditis belari] diamond 945 62 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;