RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA695140" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695140 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14705081 14705081 PRJNA695140_S_NODE_3432_length_282_cov_1.510204_g3251_i0 PRJNA695140 3432 282 1.510204 4.25877528 Vittaforma corneae 42399 Fungi Fungi 115 3.27e-21   NTclustered gi|667639983|ref|XR_552275.1| 993615 g3251 i0 79.762 3.21276595744681 168 26 58 7 38 200 1512 1348 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 906 115 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
24902366 24902366 PRJNA695140_S_NODE_11740_length_157_cov_3.383333_g11559_i0 PRJNA695140 11740 157 3.383333 5.31183281 Endoreticulatus sp. CHW-2004 Taiwan 262393 Fungi Fungi 134 4.5e-27   NTclustered gi|63095238|gb|AY960111.1| 262393 g11559 i0 97.436 8.89808917197452 78 2 50 0 67 144 285 208 Endoreticulatus sp. CHW-2004 Taiwan large subunit ribosomal RNA gene, complete sequence blastn 1397 134 1 Eukaryota Opisthokonta Fungi Microsporidia       Endoreticulatus Endoreticulatus sp. CHW-2004 Taiwan

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;