RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA695140" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695140 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7559398 7559398 PRJNA695140_S_NODE_12346_length_154_cov_2.119658_g12165_i0 PRJNA695140 12346 154 2.119658 3.26427332 Waddlia 71666 Bacteria Bacteria 193 7.14e-45   NTclustered gi|297375547|gb|CP001928.1| 716544 g12165 i0 89.61 124.116883116883 154 12 99 4 1 152 1838894 1838743 Waddlia chondrophila WSU 86-1044, complete genome blastn 19114 193 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
11385111 11385111 PRJNA695140_S_NODE_7709_length_190_cov_2.281046_g7528_i0 PRJNA695140 7709 190 2.281046 4.3339874 Parachlamydia 83551 Bacteria Bacteria 158 3.36e-34   NTclustered gi|470491594|ref|NR_077046.1| 83552 g7528 i0 82.292 19.1947368421053 192 25 99 7 3 190 1538 1724 Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence blastn 3647 158 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia acanthamoebae
13935502 13935502 PRJNA695140_S_NODE_2251_length_348_cov_56.128617_g2070_i0 PRJNA695140 2251 348 56.128617 195.32758716 Pseudomonadati 3379134 Bacteria Bacteria 527 4.489999999999998e-145   NTclustered gi|470491594|ref|NR_077046.1| 83552 g2070 i0 94.203 158.991379310345 345 20 99 0 4 348 2281 2625 Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence blastn 55329 527 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia acanthamoebae
21583787 21583787 PRJNA695140_S_NODE_1777_length_396_cov_43.370474_g1596_i0 PRJNA695140 1777 396 43.370474 171.74707704 Candidatus Rhabdochlamydia 292833 Bacteria Bacteria 643 4.919999999999999e-180   NTclustered gi|2082223669|gb|CP075585.1| 225148 g1596 i0 95.96 165.457070707071 396 16 100 0 1 396 1018382 1017987 Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome blastn 65521 643 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;