RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA695140", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA695140 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12660915 12660915 PRJNA695140_S_NODE_13250_length_150_cov_1.380531_g13069_i0 PRJNA695140 13250 150 1.380531 2.0707965 Malassezia 55193 Fungi Fungi 63.9 5.64e-6   NTclustered gi|2105650794|gb|MW683313.1| 55194 g13069 i0 97.297 24.4133333333333 37 1 25 0 40 76 911 875 Malassezia furfur strain CBS 9365 mitochondrion, complete genome blastn 3662 63.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
13935513 13935513 PRJNA695140_S_NODE_3131_length_296_cov_2.189189_g2950_i0 PRJNA695140 3131 296 2.189189 6.47999944 Opisthokonta 33154 Fungi Fungi 65.8 3.53e-6   NTclustered gi|1546630317|ref|XM_027626819.1| 76775 g2950 i0 97.368 1.38513513513514 38 1 13 0 12 49 1378 1341 Malassezia restricta alpha 1,2-mannosyltransferase (MRET_0192), partial mRNA blastn 410 65.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;