RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA695140", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA695140 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20307928 20307928 PRJNA695140_S_NODE_3036_length_300_cov_6.410646_g2855_i0 PRJNA695140 3036 300 6.410646 19.231938 Metazoa 33208 Mollusca Mollusca 555 1.7399999999999995e-153   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g2855 i0 100 53.8966666666667 300 0 100 0 1 300 1538 1837 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 16169 555 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
25408009 25408009 PRJNA695140_S_NODE_10440_length_165_cov_4.382812_g10259_i0 PRJNA695140 10440 165 4.382812 7.2316398 Ctena 102298 Mollusca Mollusca 122 1.0399999999999997e-23   NTclustered gi|2125838800|gb|OL183269.1| 881210 g10259 i0 92.857 1.52727272727273 84 6 51 0 4 87 4125 4042 Ctena bella voucher UF437018 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 252 122 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Lucinida Lucinidae Ctena Ctena bella
30493450 30493450 PRJNA695140_S_NODE_3653_length_273_cov_4.796610_g3472_i0 PRJNA695140 3653 273 4.79661 13.0947453 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0277   NR XP_067657806.1 109174 g3472 i0 35.4 1.40659340659341 65 36 70.3 2 237 46 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;