RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA694770" and tax_phylum = "Minisyncoccota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA694770 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9603020 9603020 PRJNA694770_P_NODE_45708_length_309_cov_1.305085_g45414_i0 PRJNA694770 45708 309 1.305085 4.03271265 Minisyncoccota bacterium 2053589 Bacteria Bacteria 106 2.18e-18   NTclustered gi|2621706115|emb|OY764332.1| 2053589 g45414 i0 91.026 0.618122977346278 78 7 25 0 10 87 657351 657274 MAG: Candidatus Paceibacterota bacterium isolate afe48dc8-71d9-430e-8630-11ffabd708cb genome assembly, chromosome: 1 blastn 191 106 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27114020 27114020 PRJNA694770_P_NODE_41082_length_323_cov_1.272000_g40788_i0 PRJNA694770 41082 323 1.272 4.10856 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.1 0.0142   NR MDD2657982.1 2053589 g40788 i0 52.5 0.752321981424149 40 19 37.2 0 122 3 3 42 MDD2657982.1 KTSC domain-containing protein [Candidatus Paceibacterota bacterium] diamond 243 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31852555 31852555 PRJNA694770_P_NODE_81397_length_250_cov_0.870056_g81103_i0 PRJNA694770 81397 250 0.870056 2.17514 Candidatus Spechtbacterales bacterium 3085100 Bacteria Bacteria 107 8.62e-28   NR MEX0916662.1 3085100 g81103 i0 62.7 1.992 83 30 98.4 1 248 3 34 116 MEX0916662.1 hypothetical protein [Candidatus Spechtbacterales bacterium] diamond 498 107 1 Bacteria Bacteria candidate phyla   Minisyncoccota   Candidatus Spechtbacterales     Candidatus Spechtbacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;