RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA694770" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA694770 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4502031 4502031 PRJNA694770_P_NODE_24_length_6493_cov_14.463084_g21_i0 PRJNA694770 24 6493 14.463084 939.08804412 Red mite associated cystovirus 2936548 Viruses Viruses 11950 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g21 i0 100 1.89604189126752 6471 0 99 0 1 6471 6 6476 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 12311 11950 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
4502910 4502910 PRJNA694770_P_NODE_564_length_2352_cov_207.954805_g491_i0 PRJNA694770 564 2352 207.954805 4891.0970136 Red mite associated cystovirus 2936548 Viruses Viruses 4344 0   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g491 i0 100 1.67261904761905 2352 0 100 0 1 2352 2352 1 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 3934 4344 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
7054326 7054326 PRJNA694770_P_NODE_86_length_4336_cov_56.453671_g73_i0 PRJNA694770 86 4336 56.453671 2447.83117456 Pseudomonas phage ER16 2917704 Viruses Viruses 99 5.73e-15   NTclustered gi|2209092821|gb|OM650249.1| 2917704 g73 i0 87.5 0.0202952029520295 88 8 2 3 25 112 72 156 Pseudomonas phage ER16 segment M, complete sequence blastn 88 99 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;