RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA694770", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA694770 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5779367 5779367 PRJNA694770_P_NODE_92985_length_244_cov_0.900585_g92691_i0 PRJNA694770 92985 244 0.900585 2.1974274 Plasmodium brasilianum 5824 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.73e-4   NTclustered gi|2785766342|ref|XM_067218290.1| 5824 g92691 i0 94.595 0.278688524590164 37 2 15 0 137 173 3037 3073 Plasmodium brasilianum uncharacterized protein (MKS88_005062), partial mRNA blastn 68 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
28756337 28756337 PRJNA694770_P_NODE_90867_length_245_cov_0.895349_g90573_i0 PRJNA694770 90867 245 0.895349 2.19360505 Babesia gibsoni 33632 SAR_Eukaryotes SAR_Eukaryotes 60.1 2.9e-8   NR KAK1441912.1 33632 g90573 i0 52 1.24897959183673 50 24 61.2 0 241 92 159 208 KAK1441912.1 serine/threonine-protein phosphatase 2b catalytic subunit 1-related protein [Babesia gibsoni] diamond 306 60.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;