RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA694770", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA694770 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29336024 29336024 PRJNA694770_P_NODE_67349_length_268_cov_1.579487_g67055_i0 PRJNA694770 67349 268 1.579487 4.23302516 FCB group 1783270 Bacteria Bacteria 49.7 1.68e-4   NR MCC6794513.1 2030809 g67055 i0 36 4.94776119402985 89 51 95.1 2 6 260 278 364 MCC6794513.1 glycosyltransferase family 4 protein [Candidatus Hydrogenedentota bacterium] diamond 1326 49.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30967422 30967422 PRJNA694770_P_NODE_54294_length_288_cov_1.190698_g54000_i0 PRJNA694770 54294 288 1.190698 3.42921024 Candidatus Hydrogenedens sp. 2654184 Bacteria Bacteria 80.1 9.53e-16   NR MBI1320121.1 2654184 g54000 i0 49.5 0.947916666666667 91 46 94.8 0 277 5 51 141 MBI1320121.1 hypothetical protein [Candidatus Hydrogenedens sp.] diamond 273 80.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales Candidatus Hydrogenedentaceae Candidatus Hydrogenedens Candidatus Hydrogenedens sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;