contig_metadata
11 rows where bioproject = "PRJNA694557" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5776972 | 5776972 | PRJNA694557_P_NODE_4385_length_721_cov_3.245370_g4174_i0 | PRJNA694557 | 4385 | 721 | 3.24537 | 23.3991177 | Candidatus Criblamydia sequanensis | 340071 | Bacteria | Bacteria | 771 | 0 | NTclustered | gi|678241437|emb|LK031773.1| | 1437425 | g4174 | i0 | 86.988 | 0.998613037447989 | 684 | 89 | 95 | 0 | 16 | 699 | 28854 | 29537 | Criblamydia sequanensis plasmid 1, strain CRIB-18, complete sequence | blastn | 720 | 771 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Candidatus Criblamydia | Candidatus Criblamydia sequanensis | |
| 15208316 | 15208316 | PRJNA694557_P_NODE_6232_length_582_cov_2.302554_g6013_i0 | PRJNA694557 | 6232 | 582 | 2.302554 | 13.40086428 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 152 | 1.79e-41 | NR | MBX7067559.1 | 2052178 | g6013 | i0 | 81.9 | 0.427835051546392 | 83 | 15 | 42.8 | 0 | 2 | 250 | 235 | 317 | MBX7067559.1 prolyl aminopeptidase [Parachlamydiales bacterium] | diamond | 249 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 18525251 | 18525251 | PRJNA694557_P_NODE_18615_length_292_cov_3.301370_g18395_i0 | PRJNA694557 | 18615 | 292 | 3.30137 | 9.6400004 | Parachlamydia acanthamoebae | 83552 | Bacteria | Bacteria | 527 | 3.69e-145 | NTclustered | gi|336478352|emb|FR872580.1| | 765952 | g18395 | i0 | 99.315 | 1 | 292 | 1 | 100 | 1 | 1 | 292 | 2104757 | 2105047 | Parachlamydia acanthamoebae UV-7, complete genome | blastn | 292 | 527 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 27588201 | 27588201 | PRJNA694557_P_NODE_23844_length_249_cov_0.875000_g23624_i0 | PRJNA694557 | 23844 | 249 | 0.875 | 2.17875 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 114 | 7.14e-28 | NR | HSX10843.1 | 2047757 | g23624 | i0 | 68.8 | 1.93975903614458 | 80 | 25 | 96.4 | 0 | 247 | 8 | 131 | 210 | HSX10843.1 hemolysin family protein [Chlamydiales bacterium] | diamond | 483 | 114 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28440731 | 28440731 | PRJNA694557_P_NODE_12806_length_369_cov_2.831081_g12586_i0 | PRJNA694557 | 12806 | 369 | 2.831081 | 10.44668889 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 47 | 0.00526 | NR | HSW73342.1 | 2047757 | g12586 | i0 | 24.2 | 1.04065040650407 | 128 | 87 | 96.7 | 3 | 357 | 1 | 899 | 1025 | HSW73342.1 hypothetical protein [Chlamydiales bacterium] | diamond | 384 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28630246 | 28630246 | PRJNA694557_P_NODE_3187_length_863_cov_3.098734_g2991_i0 | PRJNA694557 | 3187 | 863 | 3.098734 | 26.74207442 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 202 | 1.68e-61 | NR | MBA3958744.1 | 2052176 | g2991 | i0 | 85 | 0.371958285052144 | 107 | 16 | 37.2 | 0 | 861 | 541 | 63 | 169 | MBA3958744.1 transposase [Parachlamydiaceae bacterium] | diamond | 321 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 29766569 | 29766569 | PRJNA694557_P_NODE_24211_length_247_cov_3.206897_g23991_i0 | PRJNA694557 | 24211 | 247 | 3.206897 | 7.92103559 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 130 | 1.93e-36 | NR | MBX7065666.1 | 2052178 | g23991 | i0 | 83.8 | 0.825910931174089 | 68 | 11 | 82.6 | 0 | 23 | 226 | 90 | 157 | MBX7065666.1 hypothetical protein [Parachlamydiales bacterium] | diamond | 204 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 32275480 | 32275480 | PRJNA694557_P_NODE_22858_length_255_cov_1.692308_g22638_i0 | PRJNA694557 | 22858 | 255 | 1.692308 | 4.3153854 | Bacteria | 2 | Bacteria | Bacteria | 153 | 6.01e-44 | NR | QLH34770.1 | 2052176 | g22638 | i0 | 82.7 | 2.85882352941176 | 81 | 14 | 95.3 | 0 | 244 | 2 | 138 | 218 | QLH34770.1 MAG: IS5 family transposase [Parachlamydiaceae bacterium] | diamond | 729 | 153 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32674558 | 32674558 | PRJNA694557_P_NODE_13100_length_364_cov_3.388316_g12880_i0 | PRJNA694557 | 13100 | 364 | 3.388316 | 12.33347024 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 48.9 | 0.00105 | NR | MES2345038.1 | 2081524 | g12880 | i0 | 29.6 | 1.78021978021978 | 108 | 70 | 87.4 | 3 | 322 | 5 | 741 | 844 | MES2345038.1 hypothetical protein [Chlamydiota bacterium] | diamond | 648 | 48.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 32832177 | 32832177 | PRJNA694557_P_NODE_21520_length_266_cov_1.595855_g21300_i0 | PRJNA694557 | 21520 | 266 | 1.595855 | 4.2449743 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 142 | 3.66e-37 | NR | MEI8366527.1 | 2052176 | g21300 | i0 | 78.8 | 2.90977443609023 | 85 | 18 | 95.9 | 0 | 262 | 8 | 533 | 617 | MEI8366527.1 site-2 protease family protein [Parachlamydiaceae bacterium] | diamond | 774 | 142 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32895015 | 32895015 | PRJNA694557_P_NODE_15400_length_330_cov_1.221790_g15180_i0 | PRJNA694557 | 15400 | 330 | 1.22179 | 4.031907 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 113 | 9.65e-28 | NR | MBX7066418.1 | 2052178 | g15180 | i0 | 76.8 | 1.25454545454545 | 69 | 16 | 62.7 | 0 | 330 | 124 | 238 | 306 | MBX7066418.1 DMT family transporter [Parachlamydiales bacterium] | diamond | 414 | 113 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;