RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA694557", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA694557 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12152554 12152554 PRJNA694557_P_NODE_24470_length_246_cov_3.317919_g24250_i0 PRJNA694557 24470 246 3.317919 8.16208074 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 261 3.39e-65   NTclustered gi|238617605|gb|FJ973380.1| 45107 g24250 i0 85.714 39.8739837398374 252 30 100 3 1 246 1873 1622 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 9809 261 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
18525437 18525437 PRJNA694557_P_NODE_5055_length_661_cov_4.773810_g4839_i0 PRJNA694557 5055 661 4.77381 31.5548841 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 970 0   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4839 i0 92.996 78.0847201210287 671 37 100 6 1 661 1881 1211 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 51614 970 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;