RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA694557", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA694557 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28219325 28219325 PRJNA694557_P_NODE_20586_length_274_cov_2.009950_g20366_i0 PRJNA694557 20586 274 2.00995 5.507263 Minisyncoccota bacterium 2053589 Bacteria Bacteria 92 2.3000000000000003e-22   NR HEY6022038.1 2053589 g20366 i0 59.4 0.700729927007299 64 26 70.1 0 70 261 1 64 HEY6022038.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 192 92 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29671666 29671666 PRJNA694557_P_NODE_5770_length_610_cov_5.331471_g5551_i0 PRJNA694557 5770 610 5.331471 32.5219731 Minisyncoccota bacterium 2053589 Bacteria Bacteria 199 1.5599999999999998e-61   NR HVU80286.1 2053589 g5551 i0 76 1.27868852459016 129 31 63.4 0 3 389 52 180 HVU80286.1 signal peptidase I [Candidatus Paceibacterota bacterium] diamond 780 199 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;