RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA694557", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Roizmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA694557 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27430456 27430456 PRJNA694557_P_NODE_22943_length_254_cov_2.563536_g22723_i0 PRJNA694557 22943 254 2.563536 6.51138144 Candidatus Roizmanbacteria bacterium CG 2282149 Bacteria Bacteria 88.2 1.13e-19   NR PIV09406.1 1974846 g22723 i0 50 0.94488188976378 80 40 94.5 0 11 250 34 113 PIV09406.1 MAG: hypothetical protein COS51_02875 [Candidatus Roizmanbacteria bacterium CG03_land_8_20_14_0_80_36_21] diamond 240 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium CG03_land_8_20_14_0_80_36_21
29577020 29577020 PRJNA694557_P_NODE_26370_length_234_cov_3.000000_g26150_i0 PRJNA694557 26370 234 3 7.02 Candidatus Roizmanbacteria bacterium CG 2282149 Bacteria Bacteria 133 4.44e-34   NR PIS16013.1 1974850 g26150 i0 87 5.92307692307692 77 10 98.7 0 232 2 297 373 PIS16013.1 MAG: DNA translocase FtsK [Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9] diamond 1386 133 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9
32042504 32042504 PRJNA694557_P_NODE_5198_length_650_cov_3.292894_g4981_i0 PRJNA694557 5198 650 3.292894 21.403811 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 121 1.4900000000000002e-27   NR NTU46041.1 2282149 g4981 i0 48.1 0.747692307692308 162 73 71.5 4 185 649 1266 1423 NTU46041.1 hypothetical protein [Candidatus Roizmanbacteria bacterium] diamond 486 121 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;