RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA694557", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA694557 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28345834 28345834 PRJNA694557_P_NODE_4846_length_677_cov_5.326159_g4630_i0 PRJNA694557 4846 677 5.326159 36.05809643 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 296 6.74e-92   NR HEV8711934.1 2838779 g4630 i0 88.4 0.802067946824225 181 21 80.2 0 676 134 629 809 HEV8711934.1 DUF6094 domain-containing protein [Candidatus Binatia bacterium] diamond 543 296 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32264243 32264243 PRJNA694557_P_NODE_4918_length_672_cov_2.238731_g4702_i0 PRJNA694557 4918 672 2.238731 15.04427232 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 197 1.37e-54   NR HZR81629.1 2838779 g4702 i0 59.8 0.776785714285714 174 70 77.7 0 137 658 26 199 HZR81629.1 FG-GAP-like repeat-containing protein [Candidatus Binatia bacterium] diamond 522 197 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;